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Assembly Name: uagpf v2.0

Name: Zinc finger, TFIIS-type

Term: IPR001222  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30 uagpf v2.0 739
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
C-terminus
uagpf_v2_unigene337 uagpf v2.0 640
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
C-terminus
uagpf_v2_unigene2380 uagpf v2.0 972
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
Complete
uagpf_v2_unigene7388 uagpf v2.0 446
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
uagpf_v2_unigene9383 uagpf v2.0 1041
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
uagpf_v2_unigene10146 uagpf v2.0 561
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
N-terminus
uagpf_v2_unigene10405 uagpf v2.0 309
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 0.0
Blast2go: dna-directed rna polymerases iii kda 0.0
unknown
uagpf_v2_unigene18222 uagpf v2.0 840
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 1.44089e-22
Putative N-terminus
uagpf_v2_unigene46449 uagpf v2.0 343
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
unknown
uagpf_v2_unigene49804 uagpf v2.0 454
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 2.0e-20
Blast2go: polymerase iii (dna directed) polypeptide kda 1.56224e-25
unknown
uagpf_v2_unigene51027 uagpf v2.0 964
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
uagpf_v2_unigene51616 uagpf v2.0 358
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: sp=DNA-directed RNA polymerase subunit; Oryza sativa (Rice). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
N-terminus
uagpf_v2_unigene52015 uagpf v2.0 493
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Putative Complete
uagpf_v2_unigene52748 uagpf v2.0 449
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
unknown
uagpf_v2_unigene52882 uagpf v2.0 610
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
C-terminus
uagpf_v2_unigene53384 uagpf v2.0 530
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
C-terminus
uagpf_v2_unigene53388 uagpf v2.0 441
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=Q2HU21_MEDTR 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
N-terminus
uagpf_v2_unigene54092 uagpf v2.0 532
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Picea sitchensis RepID=D5AAK0_PICSI 2.0e-20
Blast2go: polymerase iii (dna directed) polypeptide kda 1.56224e-25
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain