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Assembly Name: uagpf v2.0

Name: DNA mismatch repair protein MutS, C-terminal

Term: IPR000432  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1435 uagpf v2.0 386
AutoFact: Unassigned protein
Blast2go: dna mismatch repair protein msh6-2 3.60484e-16
unknown
uagpf_v2_unigene1556 uagpf v2.0 525
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
Blast2go: dna mismatch repair protein 0.0
unknown
uagpf_v2_unigene5516 uagpf v2.0 577
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative Complete
uagpf_v2_unigene7291 uagpf v2.0 672
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
C-terminus
uagpf_v2_unigene10710 uagpf v2.0 617
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene13935 uagpf v2.0 582
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
C-terminus
uagpf_v2_unigene14756 uagpf v2.0 1381
AutoFact: DNA polymerase III subunit epsilon n=3 Tax=Zea mays RepID=B6TZF8_MAIZE 0.0
FL-Next: tr=DNA polymerase III subunit epsilon; Zea mays (Maize). 0.0
Blast2go: dna polymerase iii polc-type-like 0.0
Complete
uagpf_v2_unigene16785 uagpf v2.0 879
AutoFact: Potassium efflux antiporter n=4 Tax=rosids RepID=B9ICA8_POPTR 0.0
FL-Next: sp=K(+) efflux antiporter 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: k(+) efflux antiporter chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene28499 uagpf v2.0 374
AutoFact: Potassium efflux antiporter n=4 Tax=rosids RepID=B9ICA8_POPTR 0.0
FL-Next: sp=K(+) efflux antiporter 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: k(+) efflux antiporter chloroplastic-like 0.0
Internal
uagpf_v2_unigene31763 uagpf v2.0 469
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene34546 uagpf v2.0 222
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene37438 uagpf v2.0 489
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
uagpf_v2_unigene46273 uagpf v2.0 370
AutoFact: DNA mismatch repair protein MSH2, putative n=1 Tax=Ricinus communis RepID=B9RE38_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein MSH2; Zea mays (Maize). 0.0
Blast2go: dna mismatch repair protein msh2 0.0
Internal
uagpf_v2_unigene46927 uagpf v2.0 268
AutoFact: DNA mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1XBQ6_SOLLC 0.0
FL-Next: tr=OSJNBb0002J11.13 protein; Oryza sativa (Rice). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
uagpf_v2_unigene47106 uagpf v2.0 400
AutoFact: MutS homolog 7 [Triticum aestivum] 5.0e-20
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 1.47484e-24
Internal
uagpf_v2_unigene47849 uagpf v2.0 431
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Internal
uagpf_v2_unigene49540 uagpf v2.0 319
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 5.0e-22
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh3-like 2.10135e-25
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain