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Assembly Name: uagpf v2.0

Name: RNA polymerase sigma-70 factor

Term: IPR000943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10914 uagpf v2.0 575
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
C-terminus
uagpf_v2_unigene26034 uagpf v2.0 514
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
uagpf_v2_unigene35863 uagpf v2.0 246
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
Putative C-terminus
uagpf_v2_unigene41809 uagpf v2.0 377
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
unknown
uagpf_v2_unigene42855 uagpf v2.0 264
AutoFact: DNA polymerase n=1 Tax=Sorghum bicolor RepID=C5XSM7_SORBI 0.0
FL-Next: sp=DNA polymerase; subsp. trichocarpa). 0.0
Blast2go: dna polymerase epsilon subunit 1 0.0
Internal
uagpf_v2_unigene43397 uagpf v2.0 383
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 0.0
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 0.0
Internal
uagpf_v2_unigene43730 uagpf v2.0 478
AutoFact: DNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SXI7_PHYPA 2.0e-34
FL-Next: sp=DNA polymerase; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna polymerase epsilon catalytic subunit a 4.84442e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain