Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Signal recognition particle, SRP54 subunit, helical bundle

Term: IPR013822  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene1669 uagpf v2.0 761
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
Putative N-terminus
uagpf_v2_unigene3060 uagpf v2.0 522
• AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
• FL-Next: tr=Putative uncharacterized protein Sb01g050330; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: signal recognition particle receptor subunit alpha 0.0
Internal
uagpf_v2_unigene6784 uagpf v2.0 705
• AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: signal recognition particle receptor subunit alpha 0.0
N-terminus
uagpf_v2_unigene7466 uagpf v2.0 570
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
Putative coding
uagpf_v2_unigene12162 uagpf v2.0 524
• AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
• FL-Next: tr=Signal recognition particle receptor alpha subunit, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: signal recognition particle receptor subunit alpha 0.0
C-terminus
uagpf_v2_unigene15703 uagpf v2.0 485
• AutoFact: signal recognition particle receptor subunit alpha [Arabidopsis thaliana] emb|CAB79778.1| signal recognition particle receptor-like protein [Arabidopsis thaliana] gb|AAL57699.1| AT4g30600/F17I23_60 [Arabidopsis thaliana] gb|AAM91442.1| AT4g30600/F17I23_60 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle receptor subunit alpha 0.0
Internal
uagpf_v2_unigene39437 uagpf v2.0 374
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
Internal
uagpf_v2_unigene39777 uagpf v2.0 423
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Internal
uagpf_v2_unigene45180 uagpf v2.0 243
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain