Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Ribonuclease CAF1

Term: IPR006941  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene2685 uagpf v2.0 1537
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
Complete
uagpf_v2_unigene8217 uagpf v2.0 1552
• AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reticulon-like protein b8 0.0
Complete
uagpf_v2_unigene9865 uagpf v2.0 1434
• AutoFact: polyA specific ribonuclease [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 3 of Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN 0.0
• Blast2go: poly -specific ribonuclease parn-like 0.0
C-terminus
uagpf_v2_unigene12065 uagpf v2.0 913
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribonuclease caf1 0.0
Putative Complete
uagpf_v2_unigene14537 uagpf v2.0 881
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribonuclease caf1 0.0
N-terminus
uagpf_v2_unigene14597 uagpf v2.0 1009
• AutoFact: Tryptophan biosynthesis protein, trpc, putative n=1 Tax=Ricinus communis RepID=B9T1U0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: indole-3-glycerol phosphate synthase 0.0
C-terminus
uagpf_v2_unigene15978 uagpf v2.0 485
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccr4-associated factor 0.0
Internal
uagpf_v2_unigene27275 uagpf v2.0 422
• AutoFact: Tryptophan biosynthesis protein, trpc, putative n=1 Tax=Ricinus communis RepID=B9T1U0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: indole-3-glycerol phosphate synthase 0.0
Internal
uagpf_v2_unigene32531 uagpf v2.0 463
• AutoFact: Tryptophan biosynthesis protein, trpc, putative n=1 Tax=Ricinus communis RepID=B9T1U0_RICCO 0.0
• Blast2go: indole-3-glycerol phosphate synthase 0.0
unknown
uagpf_v2_unigene35093 uagpf v2.0 265
• AutoFact: polyA specific ribonuclease [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 3 of Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN 0.0
• Blast2go: poly -specific ribonuclease parn-like 0.0
Internal
uagpf_v2_unigene35422 uagpf v2.0 169
• AutoFact: proton gradient regulation 3 [Arabidopsis thaliana] sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; AltName: Full=Protein PROTON GRADIENT REGULATION 3; Flags: Precursor emb|CAB40755.1| putative p 3.0e-26
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 2.46101e-33
Internal
uagpf_v2_unigene35889 uagpf v2.0 232
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• Blast2go: ccr4-associated factor 0.0
unknown
uagpf_v2_unigene43248 uagpf v2.0 257
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccr4-associated factor 0.0
N-terminus
uagpf_v2_unigene51180 uagpf v2.0 581
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccr4-associated factor 0.0
C-terminus
uagpf_v2_unigene52379 uagpf v2.0 262
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ccr4-associated factor 0.0
C-terminus
uagpf_v2_unigene52572 uagpf v2.0 319
• AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable ccr4-associated factor 1 homolog 7-like 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain