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Assembly Name: uagpf v2.0

Name: APOBEC/CMP deaminase, zinc-binding

Term: IPR016192  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1181 uagpf v2.0 1210
AutoFact: cytidine deaminase1 [Zea mays] gb|ABL74483.1| putative cytidine deaminase [Zea mays] gb|ABL74484.1| putative cytidine deaminase [Zea mays] gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytidine deaminase 0.0
Complete
uagpf_v2_unigene2923 uagpf v2.0 676
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: replication factor a1 0.0
Putative C-terminus
uagpf_v2_unigene8446 uagpf v2.0 633
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: replication factor a1 0.0
C-terminus
uagpf_v2_unigene8476 uagpf v2.0 415
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: diaminohydroxyphosphoribosylaminopyrimidine deaminase 5-amino-6-(5-phosphoribosylamino)uracil reductase 0.0
C-terminus
uagpf_v2_unigene10476 uagpf v2.0 393
AutoFact: Cytidine deaminase n=1 Tax=Picea sitchensis RepID=A9NWW0_PICSI 0.0
Blast2go: cytidine deaminase 0.0
Putative coding
uagpf_v2_unigene11671 uagpf v2.0 348
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Putative Complete
uagpf_v2_unigene18136 uagpf v2.0 875
AutoFact: Cytidine/deoxycytidylate deaminase family protein n=3 Tax=Arabidopsis RepID=Q1PEH3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: deoxycytidylate deaminase 0.0
C-terminus
uagpf_v2_unigene25415 uagpf v2.0 316
AutoFact: tRNA-specific adenosine deaminase (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N0H0_ORYSI 3.0e-11
FL-Next: tr=CMP/dCMP deaminase, zinc-binding; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: trna-specific adenosine deaminase 9.43087e-15
C-terminus
uagpf_v2_unigene31756 uagpf v2.0 381
AutoFact: cytidine deaminase1 [Zea mays] gb|ABL74483.1| putative cytidine deaminase [Zea mays] gb|ABL74484.1| putative cytidine deaminase [Zea mays] gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] 0.0
Blast2go: cytidine deoxycytidylate deaminase-like protein 0.0
unknown
uagpf_v2_unigene35248 uagpf v2.0 387
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor a1 0.0
Internal
uagpf_v2_unigene41131 uagpf v2.0 302
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
Blast2go: replication factor a1 0.0
unknown
uagpf_v2_unigene44641 uagpf v2.0 302
AutoFact: cytidine deaminase1 [Zea mays] gb|ABL74483.1| putative cytidine deaminase [Zea mays] gb|ABL74484.1| putative cytidine deaminase [Zea mays] gb|ACG46623.1| cytidine/deoxycytidylate deaminase family protein [Zea mays] 0.0
Blast2go: cytidine deaminase 0.0
unknown
uagpf_v2_unigene47058 uagpf v2.0 487
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor a1 0.0
Internal
uagpf_v2_unigene48965 uagpf v2.0 355
AutoFact: Cytidine/deoxycytidylate deaminase family protein n=3 Tax=Arabidopsis RepID=Q1PEH3_ARATH 0.0
Blast2go: deoxycytidylate deaminase 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain