Sustainpine_db
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Assembly Name: uagpf v2.0

Name: HIP116, Rad5p N-terminal

Term: IPR014905  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4 uagpf v2.0 473
AutoFact: DNA repair helicase rad5,16, putative n=1 Tax=Ricinus communis RepID=B9SN70_RICCO 1.99993e-41
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair helicase 0.0
Internal
uagpf_v2_unigene9 uagpf v2.0 336
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI0001983C0B 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase-like transcription factor-like protein 0.0
Putative N-terminus
uagpf_v2_unigene6079 uagpf v2.0 518
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H8S6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: helicase-like transcription factor 0.0
Internal
uagpf_v2_unigene10512 uagpf v2.0 473
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal
uagpf_v2_unigene12636 uagpf v2.0 581
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene17596 uagpf v2.0 1039
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase rhp16-like 0.0
Putative C-terminus
uagpf_v2_unigene25014 uagpf v2.0 436
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
unknown
uagpf_v2_unigene25435 uagpf v2.0 461
AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene26017 uagpf v2.0 365
AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent helicase rhp16-like 0.0
Internal
uagpf_v2_unigene40042 uagpf v2.0 542
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain