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Assembly Name: uagpf v2.0

Name: LisH dimerisation motif

Term: IPR006594  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene49277 uagpf v2.0 248
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 1.0e-13
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig 3.25626e-16
Putative C-terminus
uagpf_v2_unigene49912 uagpf v2.0 540
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
N-terminus
uagpf_v2_unigene50063 uagpf v2.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene50641 uagpf v2.0 140
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 2.0e-06
Blast2go: protein 3.38822e-09
unknown
uagpf_v2_unigene50858 uagpf v2.0 395
AutoFact: BRI1-KD interacting protein 132 [Oryza sativa Japonica Group] 3.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleolar and coiled-body phosphoprotein 7.79612e-41
C-terminus
uagpf_v2_unigene51062 uagpf v2.0 812
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 8.0e-24
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 9.61252e-27
Putative C-terminus
uagpf_v2_unigene51406 uagpf v2.0 449
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Complete
uagpf_v2_unigene52400 uagpf v2.0 468
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52414 uagpf v2.0 269
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene52462 uagpf v2.0 233
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.19833e-35
Internal
uagpf_v2_unigene52522 uagpf v2.0 383
AutoFact: WD-repeat protein, putative 3.0e-10
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.45343e-13
Internal
uagpf_v2_unigene53826 uagpf v2.0 389
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 4-like 3.20794e-35
C-terminus
uagpf_v2_unigene53912 uagpf v2.0 378
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.19833e-35
Putative C-terminus
uagpf_v2_unigene54060 uagpf v2.0 387
AutoFact: WD-40 repeat family protein [Arabidopsis thaliana] dbj|BAB09017.1| unnamed protein product [Arabidopsis thaliana] gb|AAL15328.1| AT5g67320/K8K14_4 [Arabidopsis thaliana] gb|AAN28871.1| At5g67320/K8K14_4 [Arabidopsis thaliana] gb|AED98328.1| WD-40 repeat f 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene54517 uagpf v2.0 335
AutoFact: Unassigned protein
Blast2go: protein 1.89021e-15
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain