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Assembly Name: uagpf v2.0

Name: RNA polymerase II, large subunit, CTD

Term: IPR006569  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene33930 uagpf v2.0 254
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene36402 uagpf v2.0 463
AutoFact: DUF618 multi-domain protein 1.0e-20
Blast2go: enth vhs family protein 0.0
Coding
uagpf_v2_unigene36552 uagpf v2.0 318
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene38967 uagpf v2.0 387
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: swap surp domain-containing protein 2.69929e-11
Internal
uagpf_v2_unigene41042 uagpf v2.0 386
AutoFact: plastocyanin-like domain-containing protein [Arabidopsis thaliana] gb|AAB95306.1| putative phytocyanin [Arabidopsis thaliana] gb|AEC07879.1| plastocyanin-like domain-containing protein [Arabidopsis thaliana] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastocyanin-like domain-containing protein 3.72481e-34
N-terminus
uagpf_v2_unigene42771 uagpf v2.0 367
AutoFact: Tudor/PWWP/MBT domain-containing protein [Arabidopsis thaliana] gb|AAD31171.1| putative transcription factor [Arabidopsis thaliana] dbj|BAB11170.1| transcription factor-like protein [Arabidopsis thaliana] dbj|BAH30593.1| hypothetical protein [Arabidopsis 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: tudor pwwp mbt domain-containing protein 6.71891e-32
N-terminus
uagpf_v2_unigene42957 uagpf v2.0 181
AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 5.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: hypothetical protein VITISV_025939 [Vitis vinifera] 1.76982e-14
Internal
uagpf_v2_unigene43937 uagpf v2.0 377
AutoFact: DUF618 multi-domain protein 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: enth vhs family protein 0.0
Internal
uagpf_v2_unigene55608 uagpf v2.0 266
AutoFact: Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI 0.0
FL-Next: sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutathione peroxidase-like protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain