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Assembly Name: uagpf v2.0

Name: Root cap

Term: IPR009646  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1112 uagpf v2.0 358
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Coding
uagpf_v2_unigene7088 uagpf v2.0 405
AutoFact: Extensin_2 multi-domain protein 7.0e-23
unknown
uagpf_v2_unigene7946 uagpf v2.0 277
AutoFact: Root_cap domain containing protein 1.0e-24
Blast2go: structural constituent of cell 0.0
unknown
uagpf_v2_unigene8567 uagpf v2.0 505
AutoFact: pfam04554, Extensin_2, Extensin-like region 2.0e-24
unknown
uagpf_v2_unigene11916 uagpf v2.0 498
AutoFact: Root_cap domain containing protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein Sb67; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: structural constituent of cell 0.0
Putative Complete
uagpf_v2_unigene11930 uagpf v2.0 1704
AutoFact: Root cap; Antihaemostatic protein n=1 Tax=Medicago truncatula RepID=A2Q250_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of cell 0.0
Complete
uagpf_v2_unigene12639 uagpf v2.0 343
AutoFact: Extensin_2 multi-domain protein 2.0e-24
Coding
uagpf_v2_unigene12995 uagpf v2.0 577
AutoFact: Extensin_2 multi-domain protein 3.0e-23
Coding
uagpf_v2_unigene13885 uagpf v2.0 610
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Putative coding
uagpf_v2_unigene14098 uagpf v2.0 861
AutoFact: Root_cap domain containing protein 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural constituent of cell 0.0
C-terminus
uagpf_v2_unigene14766 uagpf v2.0 792
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
uagpf_v2_unigene15249 uagpf v2.0 1695
AutoFact: Structural constituent of cell wall, putative n=1 Tax=Ricinus communis RepID=B9SWC5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: structural constituent of cell 0.0
Complete
uagpf_v2_unigene15473 uagpf v2.0 1023
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene15477 uagpf v2.0 512
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene16529 uagpf v2.0 582
AutoFact: Atrophin-1 multi-domain protein 5.0e-32
unknown
uagpf_v2_unigene17342 uagpf v2.0 582
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 5.00264e-43
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
C-terminus
uagpf_v2_unigene17432 uagpf v2.0 480
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
FL-Next: tr=Putative uncharacterized protein Sb03g042800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Putative N-terminus
uagpf_v2_unigene17886 uagpf v2.0 1416
AutoFact: pfam06830, Root_cap, Root cap 1.0e-25
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: structural constituent of cell 0.0
Complete
uagpf_v2_unigene18538 uagpf v2.0 1474
AutoFact: Late embryogenesis abundant-like protein (Fragment) n=19 Tax=Picea sitchensis RepID=E0ZAL6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: late embryogenesis abundant-like protein 0.0
Complete
uagpf_v2_unigene18592 uagpf v2.0 730
AutoFact: Late embryogenesis abundant protein n=1 Tax=Picea glauca RepID=Q40862_PICGL 0.0
FL-Next: tr=Late embryogenesis abundant protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: structural constituent of cell 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain