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Assembly Name: uagpf v2.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41641 uagpf v2.0 242
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Coding
uagpf_v2_unigene42187 uagpf v2.0 205
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
uagpf_v2_unigene42614 uagpf v2.0 435
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta'' 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Internal
uagpf_v2_unigene51003 uagpf v2.0 651
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
Coding
uagpf_v2_unigene51424 uagpf v2.0 462
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52805 uagpf v2.0 611
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene53221 uagpf v2.0 507
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene53844 uagpf v2.0 317
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54263 uagpf v2.0 420
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene54518 uagpf v2.0 428
AutoFact: Extensin_2 multi-domain protein 1.0e-15
Coding
uagpf_v2_unigene54648 uagpf v2.0 682
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54701 uagpf v2.0 437
AutoFact: Extensin_2 domain containing protein 8.0e-14
Coding
uagpf_v2_unigene55581 uagpf v2.0 554
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Putative coding
uagpf_v2_unigene55598 uagpf v2.0 494
AutoFact: Drf_FH1 multi-domain protein 5.0e-18
unknown
uagpf_v2_unigene55645 uagpf v2.0 828
AutoFact: Extensin_2 multi-domain protein 1.0e-11
Putative coding
uagpf_v2_unigene55729 uagpf v2.0 993
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Coding
uagpf_v2_unigene55978 uagpf v2.0 544
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
unknown
uagpf_v2_unigene55980 uagpf v2.0 507
AutoFact: Atrophin-1 multi-domain protein 7.0e-16
Coding
uagpf_v2_unigene55988 uagpf v2.0 707
AutoFact: Extensin_2 multi-domain protein 1.0e-08
Coding
uagpf_v2_unigene55991 uagpf v2.0 633
AutoFact: Atrophin-1 multi-domain protein 4.0e-18
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain