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Assembly Name: uagpf v2.0

Name: Extensin repeat

Term: IPR006706  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20445 uagpf v2.0 531
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20447 uagpf v2.0 812
AutoFact: DUF1421 multi-domain protein 6.0e-12
Coding
uagpf_v2_unigene20453 uagpf v2.0 542
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20455 uagpf v2.0 1086
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
uagpf_v2_unigene20466 uagpf v2.0 1014
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20469 uagpf v2.0 922
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Coding
uagpf_v2_unigene20472 uagpf v2.0 656
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20473 uagpf v2.0 413
AutoFact: Extensin_2 multi-domain protein 2.0e-16
unknown
uagpf_v2_unigene20474 uagpf v2.0 1190
AutoFact: DUF1421 multi-domain protein 2.0e-16
Coding
uagpf_v2_unigene20475 uagpf v2.0 423
AutoFact: DUF1421 multi-domain protein 1.0e-18
Putative coding
uagpf_v2_unigene20477 uagpf v2.0 601
AutoFact: Extensin_2 multi-domain protein 2.0e-14
Putative coding
uagpf_v2_unigene20478 uagpf v2.0 444
AutoFact: Drf_FH1 multi-domain protein 9.0e-21
unknown
uagpf_v2_unigene28330 uagpf v2.0 403
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene29983 uagpf v2.0 416
AutoFact: Extensin_2 multi-domain protein 6.0e-21
unknown
uagpf_v2_unigene32231 uagpf v2.0 99
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene32688 uagpf v2.0 402
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene36400 uagpf v2.0 563
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene36602 uagpf v2.0 102
AutoFact: Extensin_2 domain containing protein 2.0e-12
unknown
uagpf_v2_unigene37795 uagpf v2.0 422
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene39555 uagpf v2.0 413
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Keteleeria davidiana (David's keteleeria) (Pseudotsuga davidiana). Plastid; Chloroplast. 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain