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Assembly Name: uagpf v2.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20473 uagpf v2.0 413
AutoFact: Extensin_2 multi-domain protein 2.0e-16
unknown
uagpf_v2_unigene20474 uagpf v2.0 1190
AutoFact: DUF1421 multi-domain protein 2.0e-16
Coding
uagpf_v2_unigene20478 uagpf v2.0 444
AutoFact: Drf_FH1 multi-domain protein 9.0e-21
unknown
uagpf_v2_unigene28330 uagpf v2.0 403
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene32231 uagpf v2.0 99
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene32688 uagpf v2.0 402
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene36117 uagpf v2.0 445
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
Blast2go: proline rich protein 1.12188e-28
unknown
uagpf_v2_unigene36400 uagpf v2.0 563
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene41641 uagpf v2.0 242
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Coding
uagpf_v2_unigene49627 uagpf v2.0 507
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 1.0e-19
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 3.01637e-23
N-terminus
uagpf_v2_unigene51003 uagpf v2.0 651
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
Coding
uagpf_v2_unigene51424 uagpf v2.0 462
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52805 uagpf v2.0 611
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene53221 uagpf v2.0 507
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene53844 uagpf v2.0 317
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54027 uagpf v2.0 486
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 1.12188e-28
C-terminus
uagpf_v2_unigene54263 uagpf v2.0 420
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene54518 uagpf v2.0 428
AutoFact: Extensin_2 multi-domain protein 1.0e-15
Coding
uagpf_v2_unigene54648 uagpf v2.0 682
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene55581 uagpf v2.0 554
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain