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Assembly Name: uagpf v2.0

Name: Repetitive proline-rich cell wall protein repeat

Term: IPR003883  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene17410 uagpf v2.0 1022
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene17432 uagpf v2.0 480
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
FL-Next: tr=Putative uncharacterized protein Sb03g042800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Putative N-terminus
uagpf_v2_unigene18145 uagpf v2.0 1083
AutoFact: bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana] gb|AAD43607.1|AC005698_6 T3P18.6 [Arabidopsis thaliana] gb|AAK76636.1| putative proline-rich cell wall protein [Arabidopsis thaliana] gb|AAL85077.1| 2.0e-15
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline-rich cell wall protein 2.1341e-28
Complete
uagpf_v2_unigene18358 uagpf v2.0 730
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Araucaria angustifolia. 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene18964 uagpf v2.0 432
AutoFact: Extensin_2 multi-domain protein 1.0e-16
unknown
uagpf_v2_unigene18979 uagpf v2.0 910
AutoFact: Proline-rich protein n=1 Tax=Pinus taeda RepID=Q9LLZ6_PINTA 2.0e-24
FL-Next: tr=Proline-rich protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: proline rich protein 1.12188e-28
C-terminus
uagpf_v2_unigene19009 uagpf v2.0 712
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene20072 uagpf v2.0 920
AutoFact: Flocculin-like protein n=1 Tax=Candida albicans RepID=Q59SG9_CANAL 4.0e-05
Coding
uagpf_v2_unigene20131 uagpf v2.0 822
AutoFact: DUF1421 multi-domain protein 2.0e-18
unknown
uagpf_v2_unigene20413 uagpf v2.0 1777
AutoFact: Atrophin-1 multi-domain protein 4.0e-18
Coding
uagpf_v2_unigene20415 uagpf v2.0 1529
AutoFact: Atrophin-1 multi-domain protein 7.0e-16
Coding
uagpf_v2_unigene20417 uagpf v2.0 589
AutoFact: Atrophin-1 multi-domain protein 7.0e-16
unknown
uagpf_v2_unigene20425 uagpf v2.0 677
AutoFact: Extensin_2 multi-domain protein 5.0e-10
Coding
uagpf_v2_unigene20445 uagpf v2.0 531
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20447 uagpf v2.0 812
AutoFact: DUF1421 multi-domain protein 6.0e-12
Coding
uagpf_v2_unigene20453 uagpf v2.0 542
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20455 uagpf v2.0 1086
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
uagpf_v2_unigene20466 uagpf v2.0 1014
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20469 uagpf v2.0 922
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Coding
uagpf_v2_unigene20472 uagpf v2.0 656
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain