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Assembly Name: uagpf v2.0

Name: Outer membrane autotransporter barrel

Term: IPR006315  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1112 uagpf v2.0 358
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Coding
uagpf_v2_unigene1240 uagpf v2.0 493
AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene1566 uagpf v2.0 963
AutoFact: PTEN_C2 multi-domain protein 6.0e-37
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene1744 uagpf v2.0 366
AutoFact: Extensin_2 multi-domain protein 7.0e-17
Coding
uagpf_v2_unigene2558 uagpf v2.0 425
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
uagpf_v2_unigene2579 uagpf v2.0 1099
AutoFact: proline-rich protein [Solanum tuberosum] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: extensin-like protein 1.42814e-17
N-terminus
uagpf_v2_unigene7084 uagpf v2.0 789
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Putative Complete
uagpf_v2_unigene7088 uagpf v2.0 405
AutoFact: Extensin_2 multi-domain protein 7.0e-23
unknown
uagpf_v2_unigene8567 uagpf v2.0 505
AutoFact: pfam04554, Extensin_2, Extensin-like region 2.0e-24
unknown
uagpf_v2_unigene11438 uagpf v2.0 715
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RNW2_RICCO 0.0
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: diaphanous 1 0.0
Putative C-terminus
uagpf_v2_unigene11897 uagpf v2.0 612
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Coding
uagpf_v2_unigene12519 uagpf v2.0 632
AutoFact: early nodulin-like protein 9 [Arabidopsis thaliana] dbj|BAB01165.1| unnamed protein product [Arabidopsis thaliana] gb|AAP88350.1| At3g20570 [Arabidopsis thaliana] dbj|BAF00275.1| predicted GPI-anchored protein [Arabidopsis thaliana] gb|AEE76399.1| early n 2.0e-27
Blast2go: early nodulin 55-2 7.14261e-38
Coding
uagpf_v2_unigene12920 uagpf v2.0 460
AutoFact: FAP multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene12995 uagpf v2.0 577
AutoFact: Extensin_2 multi-domain protein 3.0e-23
Coding
uagpf_v2_unigene13076 uagpf v2.0 1303
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein 0.0
Putative Complete
uagpf_v2_unigene13680 uagpf v2.0 266
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
uagpf_v2_unigene13729 uagpf v2.0 459
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
unknown
uagpf_v2_unigene13885 uagpf v2.0 610
AutoFact: Extensin_2 multi-domain protein 4.0e-24
Putative coding
uagpf_v2_unigene13974 uagpf v2.0 992
AutoFact: DNA-directed RNA polymerase n=3 Tax=Magnoliophyta RepID=B9FZ51_ORYSJ 3.9937e-43
Blast2go: dna-directed rna polymerase 0.0
Coding
uagpf_v2_unigene14220 uagpf v2.0 496
AutoFact: FAP multi-domain protein 2.0e-17
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain