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Assembly Name: uagpf v2.0

Name: Outer membrane autotransporter barrel

Term: IPR006315  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene14766 uagpf v2.0 792
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
uagpf_v2_unigene14767 uagpf v2.0 611
AutoFact: early nodulin-like protein 9 [Arabidopsis thaliana] dbj|BAB01165.1| unnamed protein product [Arabidopsis thaliana] gb|AAP88350.1| At3g20570 [Arabidopsis thaliana] dbj|BAF00275.1| predicted GPI-anchored protein [Arabidopsis thaliana] gb|AEE76399.1| early n 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: early nodulin 55-2 7.14261e-38
Putative N-terminus
uagpf_v2_unigene15473 uagpf v2.0 1023
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene15477 uagpf v2.0 512
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene15806 uagpf v2.0 405
AutoFact: FAP multi-domain protein 3.0e-19
Coding
uagpf_v2_unigene16278 uagpf v2.0 741
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
Blast2go: protein 5.85891e-26
Coding
uagpf_v2_unigene16529 uagpf v2.0 582
AutoFact: Atrophin-1 multi-domain protein 5.0e-32
unknown
uagpf_v2_unigene16614 uagpf v2.0 618
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.85891e-26
N-terminus
uagpf_v2_unigene17326 uagpf v2.0 738
AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana] 9.0e-17
FL-Next: sp=UPF0136 membrane protein At2g26240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene17432 uagpf v2.0 480
AutoFact: Tyrosine-rich hydroxyproline-rich glycoprotein (Fragment) n=1 Tax=Petroselinum crispum RepID=Q40793_PETCR 7.0e-25
FL-Next: tr=Putative uncharacterized protein Sb03g042800; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: tyrosine-rich hydroxyproline-rich glycoprotein 2.02773e-28
Putative N-terminus
uagpf_v2_unigene18579 uagpf v2.0 541
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein _027940-like 0.0
N-terminus
uagpf_v2_unigene19473 uagpf v2.0 569
AutoFact: Putative p23 co-chaperone n=1 Tax=Cryptomeria japonica RepID=Q1XG56_CRYJA 3.00018e-42
Blast2go: uncharacterized protein _027940-like 0.0
Putative coding
uagpf_v2_unigene20131 uagpf v2.0 822
AutoFact: DUF1421 multi-domain protein 2.0e-18
unknown
uagpf_v2_unigene20445 uagpf v2.0 531
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20453 uagpf v2.0 542
AutoFact: Drf_FH1 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20455 uagpf v2.0 1086
AutoFact: Drf_FH1 multi-domain protein 1.0e-18
Coding
uagpf_v2_unigene20466 uagpf v2.0 1014
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20469 uagpf v2.0 922
AutoFact: Drf_FH1 multi-domain protein 5.0e-20
Coding
uagpf_v2_unigene20472 uagpf v2.0 656
AutoFact: DUF1421 multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene20473 uagpf v2.0 413
AutoFact: Extensin_2 multi-domain protein 2.0e-16
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain