Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: SWAP/Surp

Term: IPR000061  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene15 uagpf v2.0 410
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
• Blast2go: swap domain-containing protein 0.0
unknown
uagpf_v2_unigene1821 uagpf v2.0 1236
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2558 uagpf v2.0 425
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
uagpf_v2_unigene4450 uagpf v2.0 884
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
• FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swap domain-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene6827 uagpf v2.0 575
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
• Blast2go: swap domain-containing protein 0.0
unknown
uagpf_v2_unigene7084 uagpf v2.0 789
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
Putative Complete
uagpf_v2_unigene8797 uagpf v2.0 1048
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: swap surp domain-containing protein 0.0
Internal
uagpf_v2_unigene10512 uagpf v2.0 473
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: helicase and zinc finger domain-containing protein 0.0
Internal
uagpf_v2_unigene12636 uagpf v2.0 581
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene12895 uagpf v2.0 748
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: swap surp domain-containing protein 0.0
C-terminus
uagpf_v2_unigene13680 uagpf v2.0 266
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
uagpf_v2_unigene13729 uagpf v2.0 459
• AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
• Blast2go: probable splicing factor 3a subunit 1-like 0.0
unknown
uagpf_v2_unigene13806 uagpf v2.0 698
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
• FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swap domain-containing protein 0.0
Internal
uagpf_v2_unigene14494 uagpf v2.0 522
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 6.0e-35
• Blast2go: splicing factor 4-like protein 3.78351e-44
unknown
uagpf_v2_unigene14592 uagpf v2.0 598
• AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
• FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: swap domain-containing protein 0.0
C-terminus
uagpf_v2_unigene17414 uagpf v2.0 618
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 2.0e-29
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: 20-like protein 4.23164e-33
Internal
uagpf_v2_unigene25435 uagpf v2.0 461
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain 6.0e-16
• Blast2go: helicase and zinc finger domain-containing protein 0.0
unknown
uagpf_v2_unigene26887 uagpf v2.0 462
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPT4_RICCO 0.0
• Blast2go: swap surp domain-containing protein 0.0
unknown
uagpf_v2_unigene28660 uagpf v2.0 834
• AutoFact: [DKT] COG5035 Cell cycle control protein 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cell division control protein 50 0.0
C-terminus
uagpf_v2_unigene28840 uagpf v2.0 655
• AutoFact: putative U2-associated SR140 protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain