Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ribonuclease H1, N-terminal

Term: IPR011320  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1187 uagpf v2.0 708
AutoFact: nuclease, putative 7.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rnase h domain-containing protein 7.00649e-45
C-terminus
uagpf_v2_unigene3043 uagpf v2.0 357
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
Blast2go: cyclic nucleotide gated channel 0.0
unknown
uagpf_v2_unigene6007 uagpf v2.0 1329
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
C-terminus
uagpf_v2_unigene35240 uagpf v2.0 100
AutoFact: nuclease, putative 7.0e-36
Blast2go: rnase h domain-containing protein 7.00649e-45
unknown
uagpf_v2_unigene41156 uagpf v2.0 479
AutoFact: Os02g0773400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZHE3_ORYSJ 2.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.01608e-34
Internal
uagpf_v2_unigene41571 uagpf v2.0 427
AutoFact: nuclease, putative 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase h domain-containing protein 7.00649e-45
Putative N-terminus
uagpf_v2_unigene41901 uagpf v2.0 451
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion channel 4 0.0
Internal
uagpf_v2_unigene43869 uagpf v2.0 308
AutoFact: putative RNase H [Arabidopsis thaliana] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rnase h domain-containing protein 3.3669e-31
Putative N-terminus
uagpf_v2_unigene45842 uagpf v2.0 296
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_69.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T0J2_VITVI 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel 17-like 0.0
Internal
uagpf_v2_unigene53442 uagpf v2.0 289
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
Blast2go: cyclic nucleotide gated channel 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain