Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ataxin-2, C-terminal

Term: IPR009818  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1285 uagpf v2.0 327
AutoFact: CTC-interacting domain 9 protein [Arabidopsis thaliana] dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana] 0.0
Blast2go: ctc-interacting domain 8 protein 0.0
unknown
uagpf_v2_unigene1302 uagpf v2.0 1027
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene2460 uagpf v2.0 1622
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 11 protein 0.0
Complete
uagpf_v2_unigene2772 uagpf v2.0 1126
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
uagpf_v2_unigene4443 uagpf v2.0 785
AutoFact: DUF1431 multi-domain protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 2.80566e-11
C-terminus
uagpf_v2_unigene7283 uagpf v2.0 855
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
N-terminus
uagpf_v2_unigene7746 uagpf v2.0 416
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
Blast2go: lupus la 0.0
Putative coding
uagpf_v2_unigene8603 uagpf v2.0 532
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene10846 uagpf v2.0 768
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SNG6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hydroxyproline-rich glyco protein 0.0
C-terminus
uagpf_v2_unigene14347 uagpf v2.0 691
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein rbp37 0.0
unknown
uagpf_v2_unigene14555 uagpf v2.0 1345
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene18051 uagpf v2.0 1186
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene25108 uagpf v2.0 387
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.71296e-27
Internal
uagpf_v2_unigene25408 uagpf v2.0 454
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
Blast2go: lupus la 0.0
unknown
uagpf_v2_unigene26387 uagpf v2.0 504
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene26399 uagpf v2.0 348
AutoFact: CTC-interacting domain 9 protein [Arabidopsis thaliana] dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 8 protein 0.0
Internal
uagpf_v2_unigene26569 uagpf v2.0 447
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Internal
uagpf_v2_unigene27115 uagpf v2.0 318
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene27329 uagpf v2.0 308
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SNG6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hydroxyproline-rich glyco protein 0.0
Putative N-terminus
uagpf_v2_unigene27746 uagpf v2.0 494
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain