Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ataxin-2, C-terminal

Term: IPR009818  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28024 uagpf v2.0 486
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene31991 uagpf v2.0 302
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene32321 uagpf v2.0 431
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene39371 uagpf v2.0 279
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene46916 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47470 uagpf v2.0 472
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene48099 uagpf v2.0 194
AutoFact: DUF1771 multi-domain protein 5.0e-16
Blast2go: protein 0.0
unknown
uagpf_v2_unigene48959 uagpf v2.0 409
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus
uagpf_v2_unigene51302 uagpf v2.0 308
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_61.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SNG6_VITVI 0.0
Blast2go: hydroxyproline-rich glyco protein 0.0
unknown
uagpf_v2_unigene51642 uagpf v2.0 376
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene52451 uagpf v2.0 249
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein rbp37 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain