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Assembly Name: uagpf v2.0

Name: RNA-binding protein Lupus La

Term: IPR006630  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene694 uagpf v2.0 1024
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 6.0e-18
FL-Next: tr=Lupus la ribonucleoprotein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp synthase subunit a chloroplastic 5.02155e-22
Internal
uagpf_v2_unigene1302 uagpf v2.0 1027
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene2360 uagpf v2.0 884
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: la protein 1 0.0
Internal
uagpf_v2_unigene2771 uagpf v2.0 691
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene3048 uagpf v2.0 464
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
Blast2go: lupus la 9.83978e-38
unknown
uagpf_v2_unigene4443 uagpf v2.0 785
AutoFact: DUF1431 multi-domain protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 2.80566e-11
C-terminus
uagpf_v2_unigene5470 uagpf v2.0 562
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
unknown
uagpf_v2_unigene7283 uagpf v2.0 855
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
N-terminus
uagpf_v2_unigene7746 uagpf v2.0 416
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
Blast2go: lupus la 0.0
Putative coding
uagpf_v2_unigene10770 uagpf v2.0 421
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: la protein 1 0.0
Internal
uagpf_v2_unigene12974 uagpf v2.0 955
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
uagpf_v2_unigene14555 uagpf v2.0 1345
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9SSZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene25408 uagpf v2.0 454
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
Blast2go: lupus la 0.0
unknown
uagpf_v2_unigene26569 uagpf v2.0 447
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
Internal
uagpf_v2_unigene27874 uagpf v2.0 439
AutoFact: winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana] gb|AAM10313.1| AT5g66100/K2A18_18 [Arabidopsis thaliana] gb|AAN31109.1| At5g66100/K2A18_18 [Arabidopsis thaliana] gb|AED98159.1| winged-helix DNA-binding transcription fac 5.0e-19
Blast2go: lupus la 9.83978e-38
Putative coding
uagpf_v2_unigene28370 uagpf v2.0 228
AutoFact: La protein 1 [Arabidopsis thaliana] gb|AAL07086.1| unknown protein [Arabidopsis thaliana] gb|AEE86109.1| La protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: la protein 1 0.0
Complete
uagpf_v2_unigene28585 uagpf v2.0 427
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
uagpf_v2_unigene31991 uagpf v2.0 302
AutoFact: RNA-binding protein [Arabidopsis thaliana] gb|AAK52994.1|AF375410_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK56266.1|AF367277_1 At2g43970/F6E13.10 [Arabidopsis thaliana] gb|AAK06847.1| VirF-interacting protein FIP1 [Arabidopsis thaliana] gb|AAL0708 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lupus la 0.0
C-terminus
uagpf_v2_unigene33951 uagpf v2.0 80
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
uagpf_v2_unigene39371 uagpf v2.0 279
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain