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Assembly Name: uagpf v2.0

Name: Zinc finger, CW-type

Term: IPR011124  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2 uagpf v2.0 434
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
uagpf_v2_unigene2256 uagpf v2.0 474
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
N-terminus
uagpf_v2_unigene3004 uagpf v2.0 458
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-17
Blast2go: uncharacterized protein 6.10097e-27
unknown
uagpf_v2_unigene3638 uagpf v2.0 444
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 1.0e-10
Blast2go: f-box protein at3g54460-like 8.54859e-13
unknown
uagpf_v2_unigene4060 uagpf v2.0 484
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
C-terminus
uagpf_v2_unigene4230 uagpf v2.0 1420
AutoFact: Huntingtin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9S2T8_RICCO 1.0e-28
Blast2go: histone-lysine n-methyltransferase ashh2-like 1.01747e-33
unknown
uagpf_v2_unigene4441 uagpf v2.0 676
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
Blast2go: protein 3.53968e-42
unknown
uagpf_v2_unigene4772 uagpf v2.0 775
AutoFact: PREDICTED: MORC family CW-type zinc finger 3 isoform 1 [Bos taurus] ref|XP_002685198.1| PREDICTED: MORC family CW-type zinc finger 3 [Bos taurus] gb|DAA32968.1| MORC family CW-type zinc finger 3 [Bos taurus] 5.60519e-45
Blast2go: morc family cw-type zinc finger protein 3 0.0
Coding
uagpf_v2_unigene6857 uagpf v2.0 739
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-11
Blast2go: b3 domain-containing protein 8.94514e-12
unknown
uagpf_v2_unigene9664 uagpf v2.0 791
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 6.0e-30
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 1.41321e-41
N-terminus
uagpf_v2_unigene10522 uagpf v2.0 363
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
Internal
uagpf_v2_unigene28165 uagpf v2.0 480
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: morc family cw-type zinc finger protein 0.0
C-terminus
uagpf_v2_unigene29652 uagpf v2.0 254
AutoFact: histone-lysine N-methyltransferase ATX5 [Arabidopsis thaliana] sp|Q8GZ42.1|ATX5_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX5; AltName: Full=Protein SET DOMAIN GROUP 29; AltName: Full=Trithorax-homolog protein 5; Short=TRX-homolog protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
C-terminus
uagpf_v2_unigene29702 uagpf v2.0 355
AutoFact: B3 domain-containing transcription repressor VAL2 [Arabidopsis thaliana] sp|Q5CCK4.1|VAL2_ARATH RecName: Full=B3 domain-containing transcription repressor VAL2; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE-LIKE 1; AltName: Full=Protein V 0.0
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: b3 domain-containing protein os07g0679700-like 0.0
Internal
uagpf_v2_unigene30676 uagpf v2.0 559
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene32728 uagpf v2.0 259
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Putative uncharacterized protein Sb02g042440; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: zinc ion binding protein 2.44546e-40
Internal
uagpf_v2_unigene33914 uagpf v2.0 359
AutoFact: zf-CW domain containing protein 2.0e-10
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: b3 domain-containing protein os07g0679700-like 0.0
Internal
uagpf_v2_unigene35208 uagpf v2.0 187
AutoFact: CW-type zinc-finger protein [Arabidopsis thaliana] dbj|BAC42503.1| unknown protein [Arabidopsis thaliana] gb|AAP21295.1| At4g15730 [Arabidopsis thaliana] gb|AEE83641.1| CW-type zinc-finger protein [Arabidopsis thaliana] 2.0e-07
Blast2go: zinc ion binding protein 2.44546e-40
unknown
uagpf_v2_unigene35278 uagpf v2.0 127
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEC06861.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 9.0e-36
Blast2go: protein 0.0
unknown
uagpf_v2_unigene35926 uagpf v2.0 326
AutoFact: Unassigned protein
Blast2go: set domain protein 1.4498e-27
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain