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Assembly Name: uagpf v2.0

Name: Vps54-like

Term: IPR012501  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1856 uagpf v2.0 750
AutoFact: TATA box binding protein (TBP) associated factor (TAF)-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=SNF2 superfamily chromatin remodeling protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tata-binding protein-associated factor 0.0
C-terminus
uagpf_v2_unigene5332 uagpf v2.0 371
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene7940 uagpf v2.0 510
AutoFact: switch 2 [Arabidopsis thaliana] gb|AEE27606.1| switch 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 super family 0.0
Internal
uagpf_v2_unigene13443 uagpf v2.0 696
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
uagpf_v2_unigene19800 uagpf v2.0 945
AutoFact: Caldesmon multi-domain protein 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxilin-related protein 2-like 0.0
C-terminus
uagpf_v2_unigene28241 uagpf v2.0 378
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene28545 uagpf v2.0 514
AutoFact: Caldesmon multi-domain protein 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxilin-related protein 2-like 0.0
Putative N-terminus
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene34505 uagpf v2.0 312
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
uagpf_v2_unigene36742 uagpf v2.0 442
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
uagpf_v2_unigene37165 uagpf v2.0 406
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene37202 uagpf v2.0 448
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene42234 uagpf v2.0 347
AutoFact: Vacuolar protein sorting, putative n=1 Tax=Ricinus communis RepID=B9SLV8_RICCO 2.0e-28
Blast2go: vacuolar protein sorting-associated protein 54-like 1.07313e-31
Coding
uagpf_v2_unigene43390 uagpf v2.0 265
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase ino80-like 0.0
Internal
uagpf_v2_unigene45316 uagpf v2.0 259
AutoFact: Vacuolar protein sorting, putative n=1 Tax=Ricinus communis RepID=B9SLV8_RICCO 2.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: vacuolar protein sorting-associated protein 54-like 1.07313e-31
Internal
uagpf_v2_unigene45606 uagpf v2.0 229
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene47903 uagpf v2.0 272
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene48380 uagpf v2.0 387
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene54982 uagpf v2.0 432
AutoFact: Caldesmon multi-domain protein 7.0e-18
Blast2go: auxilin-related protein 2-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain