Sustainpine_db
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Assembly Name: uagpf v2.0

Name: HMG-I/HMG-Y, DNA-binding, conserved site

Term: IPR000637  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene608 uagpf v2.0 184
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7654 uagpf v2.0 1892
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete
uagpf_v2_unigene8213 uagpf v2.0 1392
AutoFact: bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] gb|AAL86355.1| unknown protein [Arabidopsis thaliana] gb|AAM91681.1| unknown protein [Arabidopsis thaliana] gb|AEE83024.1| bromo-adjacent homology (BAH) domain-containing prote 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: bah and coiled-coil domain-containing protein 0.0
C-terminus
uagpf_v2_unigene10669 uagpf v2.0 410
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homeobox protein 0.0
Internal
uagpf_v2_unigene13804 uagpf v2.0 671
AutoFact: DNA-3-methyladenine glycosylase II [Arabidopsis thaliana] emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] gb|AAO63339.1| At3g50880 [Arabidopsis 0.0
Blast2go: gpd base excision dna repair family protein 0.0
Coding
uagpf_v2_unigene15472 uagpf v2.0 690
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
Blast2go: protease do-like 9-like 0.0
unknown
uagpf_v2_unigene16257 uagpf v2.0 492
AutoFact: DNA-3-methyladenine glycosylase II [Arabidopsis thaliana] emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana] gb|AAO63339.1| At3g50880 [Arabidopsis 0.0
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: gpd base excision dna repair family protein 0.0
C-terminus
uagpf_v2_unigene17992 uagpf v2.0 784
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative C-terminus
uagpf_v2_unigene26482 uagpf v2.0 347
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
Blast2go: homeobox protein 0.0
Coding
uagpf_v2_unigene27026 uagpf v2.0 399
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Internal
uagpf_v2_unigene36246 uagpf v2.0 505
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
C-terminus
uagpf_v2_unigene38068 uagpf v2.0 511
AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 2.0e-34
FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Blast2go: antagonist of e2f-dp complex 0.0
Internal
uagpf_v2_unigene39055 uagpf v2.0 423
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 4.0e-10
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
uagpf_v2_unigene45657 uagpf v2.0 264
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.6812e-39
Internal
uagpf_v2_unigene48735 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene49917 uagpf v2.0 287
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
Putative C-terminus
uagpf_v2_unigene54022 uagpf v2.0 698
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain