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Assembly Name: uagpf v2.0

Name: C-type lectin, conserved site

Term: IPR018378  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1866 uagpf v2.0 1316
AutoFact: DUF2054 domain containing protein 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized protein 0.0
Complete
uagpf_v2_unigene1946 uagpf v2.0 968
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene2439 uagpf v2.0 1242
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Putative N-terminus
uagpf_v2_unigene2832 uagpf v2.0 589
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mlo-like protein 11 0.0
C-terminus
uagpf_v2_unigene3104 uagpf v2.0 693
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
N-terminus
uagpf_v2_unigene3749 uagpf v2.0 1277
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Putative Complete
uagpf_v2_unigene4183 uagpf v2.0 664
AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 3.0e-14
Blast2go: polynucleotide adenylyltransferase-like protein 5.56459e-15
unknown
uagpf_v2_unigene4281 uagpf v2.0 473
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding
uagpf_v2_unigene4588 uagpf v2.0 745
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger family protein 0.0
Internal
uagpf_v2_unigene4920 uagpf v2.0 762
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
unknown
uagpf_v2_unigene5769 uagpf v2.0 1139
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene6671 uagpf v2.0 970
AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
C-terminus
uagpf_v2_unigene7549 uagpf v2.0 899
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
uagpf_v2_unigene7846 uagpf v2.0 907
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
Blast2go: zinc finger 0.0
Putative coding
uagpf_v2_unigene8044 uagpf v2.0 478
AutoFact: Os01g0104000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q658C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8358 uagpf v2.0 655
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
N-terminus
uagpf_v2_unigene9027 uagpf v2.0 437
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
Internal
uagpf_v2_unigene9467 uagpf v2.0 394
AutoFact: Putative copia protein n=1 Tax=Oryza sativa Japonica Group RepID=Q84T44_ORYSJ 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type pol polyprotein 5.32162e-27
C-terminus
uagpf_v2_unigene9475 uagpf v2.0 437
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R8R6_RICCO 0.0
FL-Next: sp=Probable S-acyltransferase At4g15080; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene10002 uagpf v2.0 296
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain