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Assembly Name: uagpf v2.0

Name: C-type lectin, conserved site

Term: IPR018378  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10262 uagpf v2.0 421
AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: polynucleotide adenylyltransferase-like protein 0.0
Internal
uagpf_v2_unigene12143 uagpf v2.0 583
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
uagpf_v2_unigene12364 uagpf v2.0 1031
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S4Y7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
Complete
uagpf_v2_unigene13819 uagpf v2.0 785
AutoFact: fiber protein Fb2 [Gossypium barbadense] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene14194 uagpf v2.0 408
AutoFact: fiber protein Fb2 [Gossypium barbadense] 3.0e-39
Blast2go: protein 0.0
unknown
uagpf_v2_unigene16289 uagpf v2.0 564
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
uagpf_v2_unigene17188 uagpf v2.0 1648
AutoFact: protein dehydration-INDUCED 19-4 [Arabidopsis thaliana] sp|Q8VXU6.1|DI194_ARATH RecName: Full=Protein DEHYDRATION-INDUCED 19 homolog 4; Short=AtDi19-4 gb|AAL67123.1| AT3g06760/F3E22_10 [Arabidopsis thaliana] gb|AAM91471.1| AT3g06760/F3E22_10 [Arabidopsis 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dehydration-induced 19-like 0.0
Complete
uagpf_v2_unigene26355 uagpf v2.0 621
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
uagpf_v2_unigene29035 uagpf v2.0 299
AutoFact: putative S-acyltransferase [Arabidopsis thaliana] sp|Q6DR03.1|ZDHC3_ARATH RecName: Full=Probable S-acyltransferase At2g33640; AltName: Full=Probable palmitoyltransferase At2g33640; AltName: Full=Zinc finger DHHC domain-containing protein At2g33640 gb|AAT6 2.0e-08
FL-Next: sp=Probable S-acyltransferase At2g33640; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
uagpf_v2_unigene29406 uagpf v2.0 412
AutoFact: RING-H2 finger protein RHG1a-like n=1 Tax=Oryza sativa Japonica Group RepID=Q5N7R4_ORYSJ 0.0
Blast2go: protein binding protein 0.0
Coding
uagpf_v2_unigene29736 uagpf v2.0 176
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
C-terminus
uagpf_v2_unigene30216 uagpf v2.0 210
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding
uagpf_v2_unigene31988 uagpf v2.0 294
AutoFact: Poly(A) polymerase, putative n=1 Tax=Ricinus communis RepID=B9T6L0_RICCO 3.0e-14
Blast2go: polynucleotide adenylyltransferase-like protein 5.56459e-15
unknown
uagpf_v2_unigene32577 uagpf v2.0 95
AutoFact: DHHC-type zinc finger family protein [Arabidopsis thaliana] sp|Q8L5Y5.1|ZDH17_ARATH RecName: Full=Probable S-acyltransferase At4g15080; AltName: Full=Probable palmitoyltransferase At4g15080; AltName: Full=Zinc finger DHHC domain-containing protein At4g150 2.0e-07
Blast2go: probable s-acyltransferase at4g15080-like 4.62259e-09
unknown
uagpf_v2_unigene33636 uagpf v2.0 418
AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CRZ8_VITVI 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 23-like 0.0
Putative coding
uagpf_v2_unigene33860 uagpf v2.0 214
AutoFact: fiber protein Fb2 [Gossypium barbadense] 3.0e-39
Blast2go: protein 0.0
unknown
uagpf_v2_unigene34330 uagpf v2.0 264
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9S040_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene35226 uagpf v2.0 216
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9S040_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene36281 uagpf v2.0 584
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
Blast2go: cleavage and polyadenylation specificity 0.0
unknown
uagpf_v2_unigene36834 uagpf v2.0 426
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain