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Assembly Name: uagpf v2.0

Name: Excinuclease ABC, C subunit, N-terminal

Term: IPR000305  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2403 uagpf v2.0 505
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
N-terminus
uagpf_v2_unigene3823 uagpf v2.0 969
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene4418 uagpf v2.0 782
AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene24995 uagpf v2.0 584
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
C-terminus
uagpf_v2_unigene27143 uagpf v2.0 564
AutoFact: holiday junction resolvase, S1x1p, URI domain nuclease 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene27780 uagpf v2.0 317
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene37949 uagpf v2.0 553
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gb|AAM20281.1| put 0.0
FL-Next: tr=2-oxoglutarate dehydrogenase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 2-oxoglutarate e1 component 0.0
Internal
uagpf_v2_unigene41192 uagpf v2.0 352
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gb|AAM20281.1| put 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: 2-oxoglutarate e1 component 0.0
Internal
uagpf_v2_unigene41778 uagpf v2.0 512
AutoFact: 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] dbj|BAB10682.1| 2-oxoglutarate dehydrogenase, E1 component [Arabidopsis thaliana] gb|AAL67070.1| putative 2-oxoglutarate dehydrogenase E1 component [Arabidopsis thaliana] gb|AAM20281.1| put 0.0
FL-Next: tr=2-oxoglutarate dehydrogenase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 2-oxoglutarate e1 component 0.0
Internal
uagpf_v2_unigene44377 uagpf v2.0 359
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene45448 uagpf v2.0 377
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46927 uagpf v2.0 268
AutoFact: DNA mismatch repair protein (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1XBQ6_SOLLC 0.0
FL-Next: tr=OSJNBb0002J11.13 protein; Oryza sativa (Rice). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
uagpf_v2_unigene47187 uagpf v2.0 417
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01940 t7b11_20 0.0
C-terminus
uagpf_v2_unigene49412 uagpf v2.0 317
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4224e-14
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain