Sustainpine_db
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Assembly Name: uagpf v2.0

Name: DNA mismatch repair protein, C-terminal

Term: IPR013507  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38761 uagpf v2.0 417
AutoFact: pfam02138, Beach, Beige/BEACH domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 and beach domain-containing protein 0.0
Internal
uagpf_v2_unigene40497 uagpf v2.0 303
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RIQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Internal
uagpf_v2_unigene42420 uagpf v2.0 350
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna mismatch repair protein mlh1 0.0
Internal
uagpf_v2_unigene42937 uagpf v2.0 96
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: atp binding 0.0
Putative C-terminus
uagpf_v2_unigene42940 uagpf v2.0 172
AutoFact: copper ion binding protein, putative; K13171 serine/arginine repetitive matrix protein 1 1.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 4.95543e-08
Internal
uagpf_v2_unigene43767 uagpf v2.0 225
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mismatch repair endonuclease pms2-like 2.10195e-44
Internal
uagpf_v2_unigene44202 uagpf v2.0 179
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Internal
uagpf_v2_unigene46542 uagpf v2.0 185
AutoFact: Protein MSP1, putative n=1 Tax=Ricinus communis RepID=B9T1I4_RICCO 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase domain-containing protein 0.0
unknown
uagpf_v2_unigene47928 uagpf v2.0 373
AutoFact: copper ion binding protein, putative; K13171 serine/arginine repetitive matrix protein 1 1.0e-06
Blast2go: protein 4.95543e-08
Coding
uagpf_v2_unigene49797 uagpf v2.0 413
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase1 0.0
C-terminus
uagpf_v2_unigene52370 uagpf v2.0 288
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain