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Assembly Name: uagpf v2.0

Name: C-5 cytosine methyltransferase

Term: IPR001525  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10947 uagpf v2.0 361
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytosine-5 dna methyltransferase 0.0
Internal
uagpf_v2_unigene11206 uagpf v2.0 469
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Populus trichocarpa RepID=B9INZ1_POPTR 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna methyltransferase 0.0
Internal
uagpf_v2_unigene11881 uagpf v2.0 2621
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Complete
uagpf_v2_unigene17114 uagpf v2.0 1760
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTS9_ELAGV 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 3; Zea mays (Maize). 0.0
Blast2go: DNA (cytosine-5)-methyltransferase 0.0
N-terminus
uagpf_v2_unigene17293 uagpf v2.0 862
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene18608 uagpf v2.0 1122
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene18690 uagpf v2.0 833
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.77342e-21
C-terminus
uagpf_v2_unigene18764 uagpf v2.0 662
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18875 uagpf v2.0 548
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene25068 uagpf v2.0 451
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene25191 uagpf v2.0 676
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
unknown
uagpf_v2_unigene25880 uagpf v2.0 482
AutoFact: protein kinase protein with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana] dbj|BAB01918.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75399.1| protein kinase protein with adenine nucleotide alpha hydrol 0.0
Blast2go: atp binding 0.0
Putative coding
uagpf_v2_unigene26070 uagpf v2.0 481
AutoFact: Cytosine-specific methyltransferase n=2 Tax=Hieracium RepID=D0V1M9_HIEPL 0.0
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Blast2go: cytosine-5 dna methyltransferase 0.0
C-terminus
uagpf_v2_unigene26167 uagpf v2.0 247
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
uagpf_v2_unigene26866 uagpf v2.0 268
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 2.0e-37
Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 0.0
unknown
uagpf_v2_unigene27683 uagpf v2.0 358
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene28079 uagpf v2.0 452
AutoFact: DNA (cytosine-5)-methyltransferase 1B n=9 Tax=Poaceae RepID=DNM1B_ORYSJ 2.0e-27
FL-Next: Isoform 3 of DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica GN=MET1B 0.0
Blast2go: dna methyltransferase 3.85279e-31
Internal
uagpf_v2_unigene28174 uagpf v2.0 544
AutoFact: Unassigned protein
Blast2go: pentatricopeptide repeat-containing protein at3g49142-like 0.0
Putative coding
uagpf_v2_unigene28541 uagpf v2.0 489
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
Coding
uagpf_v2_unigene29551 uagpf v2.0 361
AutoFact: GQ02818.B7_C13 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02818_C13 5', mRNA sequence. 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.21549e-39
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain