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Assembly Name: uagpf v2.0

Name: K Homology domain, type 1

Term: IPR004088  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12447 uagpf v2.0 415
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=2 Tax=Malpighiales RepID=B9IFR5_POPTR 0.0
Blast2go: abc transporter b family member 1-like 0.0
Putative coding
uagpf_v2_unigene13420 uagpf v2.0 932
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB82947.1| putative protein [Arabidopsis thaliana] gb|ABP88117.1| At3g62330 [Arabidopsis thaliana] gb|AEE80339.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene13697 uagpf v2.0 716
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=3 Tax=Malpighiales RepID=B9HM46_POPTR 0.0
Blast2go: abc transporter b family member 20-like 0.0
unknown
uagpf_v2_unigene13828 uagpf v2.0 410
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 5.0e-16
Blast2go: splicing factor 1 0.0
Putative coding
uagpf_v2_unigene14421 uagpf v2.0 2256
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64022.1| unknown protein [Arabidopsis thaliana] gb|AAM44907.1| unknown protein [Arabidopsis thaliana] gb|AED95351.1| RNA-b 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene14423 uagpf v2.0 831
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 0.0
Complete
uagpf_v2_unigene14582 uagpf v2.0 1156
AutoFact: Zinc finger CCCH domain-containing protein 14 n=2 Tax=Oryza sativa RepID=C3H14_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 14-like 0.0
C-terminus
uagpf_v2_unigene14706 uagpf v2.0 845
AutoFact: pfam00013, KH_1, KH domain 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
uagpf_v2_unigene15063 uagpf v2.0 623
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family n=5 Tax=core eudicotyledons RepID=B9IJV9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Complete
uagpf_v2_unigene15327 uagpf v2.0 350
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB82947.1| putative protein [Arabidopsis thaliana] gb|ABP88117.1| At3g62330 [Arabidopsis thaliana] gb|AEE80339.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene15692 uagpf v2.0 1361
AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upstream element-binding protein 0.0
N-terminus
uagpf_v2_unigene15896 uagpf v2.0 635
AutoFact: Zinc finger CCCH domain-containing protein 14 n=2 Tax=Oryza sativa RepID=C3H14_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 14-like 0.0
Putative N-terminus
uagpf_v2_unigene15916 uagpf v2.0 664
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
Putative Complete
uagpf_v2_unigene16320 uagpf v2.0 559
AutoFact: DUF3411 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene16632 uagpf v2.0 3047
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01176.1| hypothetical protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete
uagpf_v2_unigene16909 uagpf v2.0 422
AutoFact: Putative KH-domain containing protein n=1 Tax=Medicago truncatula RepID=B3SGL8_MEDTR 0.0
Blast2go: rna-binding protein nova-1-like 0.0
Putative coding
uagpf_v2_unigene17339 uagpf v2.0 951
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana] gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana] gb|AAP68215.1| At1g51580 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
uagpf_v2_unigene17557 uagpf v2.0 1499
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana] gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana] gb|AAP68215.1| At1g51580 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
Putative N-terminus
uagpf_v2_unigene17610 uagpf v2.0 229
AutoFact: KH_1 domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding 0.0
Internal
uagpf_v2_unigene18528 uagpf v2.0 639
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana] gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana] gb|AAP68215.1| At1g51580 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain