Sustainpine_db
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Assembly Name: uagpf v2.0

Name: K Homology domain, type 1

Term: IPR004088  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6210 uagpf v2.0 1664
AutoFact: KH domain containing protein, putative [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
N-terminus
uagpf_v2_unigene6308 uagpf v2.0 498
AutoFact: Putative KH-domain containing protein n=1 Tax=Medicago truncatula RepID=B3SGL8_MEDTR 0.0
Blast2go: rna-binding protein nova-1-like 0.0
unknown
uagpf_v2_unigene6335 uagpf v2.0 1007
AutoFact: KH domain containing protein, putative [Solanum demissum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
C-terminus
uagpf_v2_unigene6515 uagpf v2.0 824
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 14-like 0.0
N-terminus
uagpf_v2_unigene6707 uagpf v2.0 1879
AutoFact: RecName: Full=Zinc finger CCCH domain-containing protein 14; Short=OsC3H14 dbj|BAD15406.1| KH domain-containing protein-like [Oryza sativa Japonica Group] gb|EAY84850.1| hypothetical protein OsI_06216 [Oryza sativa Indica Group] gb|EAZ22072.1| hypothetica 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 14-like 4.03372e-34
Putative Complete
uagpf_v2_unigene6878 uagpf v2.0 1875
AutoFact: KH_1 domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding 0.0
Putative Complete
uagpf_v2_unigene7366 uagpf v2.0 621
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: callose synthase 10 0.0
Putative N-terminus
uagpf_v2_unigene7430 uagpf v2.0 534
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
Blast2go: abc transporter b family member 0.0
unknown
uagpf_v2_unigene7516 uagpf v2.0 635
AutoFact: upstream element-binding protein [Arabidopsis thaliana] gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana] gb|AAM15002.1| unknown protein [Arabidopsis thaliana] gb|AAM15045.1| unknown protein [Arabidopsis thaliana] dbj|BAE98938.1| hypothetical protei 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: nucleic acid binding 0.0
Putative C-terminus
uagpf_v2_unigene7709 uagpf v2.0 650
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64022.1| unknown protein [Arabidopsis thaliana] gb|AAM44907.1| unknown protein [Arabidopsis thaliana] gb|AED95351.1| RNA-b 0.0
unknown
uagpf_v2_unigene8402 uagpf v2.0 375
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 5 0.0
Internal
uagpf_v2_unigene8517 uagpf v2.0 711
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 0.0
Internal
uagpf_v2_unigene8869 uagpf v2.0 1037
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
C-terminus
uagpf_v2_unigene9278 uagpf v2.0 226
AutoFact: Glycosyl transferase, family 48 [Medicago truncatula] 0.0
FL-Next: sp=Callose synthase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 3-like 0.0
Internal
uagpf_v2_unigene10034 uagpf v2.0 488
AutoFact: Callose synthase 3 n=2 Tax=Arabidopsis thaliana RepID=CALS3_ARATH 0.0
FL-Next: sp=Callose synthase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
uagpf_v2_unigene10975 uagpf v2.0 224
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
uagpf_v2_unigene11041 uagpf v2.0 404
AutoFact: pfam00013, KH_1, KH domain 8.0e-12
FL-Next: tr=Nucleic acid binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
Internal
uagpf_v2_unigene11292 uagpf v2.0 391
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
uagpf_v2_unigene11788 uagpf v2.0 403
AutoFact: RNA-binding KH domain-containing protein [Arabidopsis thaliana] gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana] gb|AAP37761.1| At5g53060 [Arabidopsis thaliana] gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kh domain-containing protein at4g18375-like 0.0
N-terminus
uagpf_v2_unigene11932 uagpf v2.0 2141
AutoFact: putative RNA binding protein [Oryza sativa Japonica Group] gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica Group] dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE59537.1| hypothetical protein OsJ_1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain