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Assembly Name: uagpf v2.0

Name: Toprim domain

Term: IPR006171  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1736 uagpf v2.0 331
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7359 uagpf v2.0 889
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8351 uagpf v2.0 487
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene9271 uagpf v2.0 713
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU60_VITVI 0.0
Blast2go: dna topoisomerase 0.0
unknown
uagpf_v2_unigene10049 uagpf v2.0 340
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene25087 uagpf v2.0 636
AutoFact: Toprim domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KFM9_ARALL 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g026990; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: toprim domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene29099 uagpf v2.0 339
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit b 0.0
Internal
uagpf_v2_unigene31236 uagpf v2.0 349
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene34269 uagpf v2.0 309
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene36424 uagpf v2.0 543
AutoFact: Myosin class 11-1 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX1_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene37423 uagpf v2.0 344
AutoFact: myosin XI [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myosin-h heavy chain-like 0.0
Putative Complete
uagpf_v2_unigene39895 uagpf v2.0 318
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
Blast2go: zinc finger 2.45808e-31
Coding
uagpf_v2_unigene40340 uagpf v2.0 296
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene40534 uagpf v2.0 301
AutoFact: Myosin class 11-2 n=1 Tax=Adiantum capillus-veneris RepID=Q5NTX0_ADICA 8.0e-30
FL-Next: tr=Myosin class 11-2; Adiantum capillus-veneris (Maidenhair fern). 0.0
Blast2go: myosin-like protein 8.12413e-35
Internal
uagpf_v2_unigene42990 uagpf v2.0 407
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U9K8_VITVI 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna topoisomerase 3-beta-1-like 1.45692e-32
Internal
uagpf_v2_unigene43167 uagpf v2.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna topoisomerase iii 4.2039e-44
Internal
uagpf_v2_unigene43665 uagpf v2.0 66
AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
Blast2go: dna gyrase subunit b 0.0
unknown
uagpf_v2_unigene47580 uagpf v2.0 344
AutoFact: toprim domain-containing protein [Arabidopsis thaliana] gb|ACI49800.1| At1g30680 [Arabidopsis thaliana] gb|AEE31259.1| toprim domain-containing protein [Arabidopsis thaliana] 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nucleic acid binding 0.0
Internal
uagpf_v2_unigene53786 uagpf v2.0 487
AutoFact: toprim domain-containing protein [Arabidopsis thaliana] gb|ACI49800.1| At1g30680 [Arabidopsis thaliana] gb|AEE31259.1| toprim domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nucleic acid binding 0.0
Internal
uagpf_v2_unigene54100 uagpf v2.0 522
AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
Blast2go: zinc finger 2.45808e-31
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain