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Assembly Name: uagpf v2.0

Name: Neuraxin/MAP1B repeat

Term: IPR000102  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene227 uagpf v2.0 847
AutoFact: ABC transporter, putative n=5 Tax=Oryza sativa RepID=Q53QH6_ORYSJ 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 10-like 0.0
Internal
uagpf_v2_unigene1477 uagpf v2.0 540
AutoFact: heat-shock protein [Arabidopsis thaliana] 0.0
unknown
uagpf_v2_unigene2730 uagpf v2.0 688
AutoFact: putative DEAD-box protein abstrakt [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
C-terminus
uagpf_v2_unigene3208 uagpf v2.0 783
AutoFact: Putative multidrug resistance-associated protein 7 n=2 Tax=Oryza sativa Japonica Group RepID=Q5SMN1_ORYSJ 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 13-like 1.19859e-37
Putative Complete
uagpf_v2_unigene5651 uagpf v2.0 996
AutoFact: Heat shock 70 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9SQC9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 91 0.0
N-terminus
uagpf_v2_unigene7268 uagpf v2.0 633
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene10268 uagpf v2.0 145
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SW84_RICCO 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 42-like 0.0
Internal
uagpf_v2_unigene10447 uagpf v2.0 400
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9GRC2_POPTR 0.0
FL-Next: sp=ABC transporter C family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 5-like 0.0
Internal
uagpf_v2_unigene10940 uagpf v2.0 448
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene11445 uagpf v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal
uagpf_v2_unigene12238 uagpf v2.0 748
AutoFact: ABC transporter C family member 5 n=4 Tax=Arabidopsis RepID=AB5C_ARATH 0.0
Blast2go: abc transporter c family member 5-like 0.0
unknown
uagpf_v2_unigene13552 uagpf v2.0 481
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
C-terminus
uagpf_v2_unigene13793 uagpf v2.0 674
AutoFact: Dimer_Tnp_hAT domain containing protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: PREDICTED: uncharacterized protein LOC100818429 [Glycine max] 0.0
N-terminus
uagpf_v2_unigene14399 uagpf v2.0 1787
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
C-terminus
uagpf_v2_unigene15261 uagpf v2.0 577
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene15985 uagpf v2.0 775
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Internal
uagpf_v2_unigene16189 uagpf v2.0 890
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene16876 uagpf v2.0 593
AutoFact: DEAD-box ATP-dependent RNA helicase 46 n=2 Tax=Arabidopsis RepID=F4K6V1_ARATH 6.0e-16
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 40; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 46 1.55344e-19
N-terminus
uagpf_v2_unigene18955 uagpf v2.0 672
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: sp=ABC transporter C family member 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 2 0.0
C-terminus
uagpf_v2_unigene19168 uagpf v2.0 2157
AutoFact: Heat shock 70 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9SQC9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 91 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain