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Assembly Name: uagpf v2.0

Name: ABC transporter, transmembrane domain

Term: IPR001140  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37048 uagpf v2.0 434
AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
uagpf_v2_unigene37086 uagpf v2.0 483
AutoFact: Multidrug/pheromone exporter, MDR family, ABC transporter family (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IJP4_POPTR 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 3.08914e-33
N-terminus
uagpf_v2_unigene37901 uagpf v2.0 430
AutoFact: ATNAP8, putative n=1 Tax=Ricinus communis RepID=B9R9H4_RICCO 0.0
FL-Next: Isoform 2 of ABC transporter B family member 28 OS=Arabidopsis thaliana GN=ABCB28 0.0
Blast2go: abc transporter b family member 28 0.0
Putative N-terminus
uagpf_v2_unigene38322 uagpf v2.0 414
AutoFact: SAND family protein [Arabidopsis thaliana] gb|AAL10492.1| At2g28390/T1B3.9 [Arabidopsis thaliana] gb|AAD20687.2| expressed protein [Arabidopsis thaliana] gb|AAM91354.1| At2g28390/T1B3.9 [Arabidopsis thaliana] dbj|BAC42668.1| unknown protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sand family protein 0.0
N-terminus
uagpf_v2_unigene38915 uagpf v2.0 419
AutoFact: ABC transporter B family member 18 [Arabidopsis thaliana] sp|Q9LSJ5.1|AB18B_ARATH RecName: Full=ABC transporter B family member 18; Short=ABC transporter ABCB.18; Short=AtABCB18; AltName: Full=P-glycoprotein 18; AltName: Full=Putative multidrug resistance 2.0e-32
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 3.8931e-40
Internal
uagpf_v2_unigene39324 uagpf v2.0 236
AutoFact: multidrug resistance-associated protein 14 [Arabidopsis thaliana] gb|AEE79882.1| multidrug resistance-associated protein 14 [Arabidopsis thaliana] 4.0e-30
Blast2go: abc transporter c family member 10-like 2.45215e-30
unknown
uagpf_v2_unigene39857 uagpf v2.0 390
AutoFact: ABC transporter C family member 2 [Arabidopsis thaliana] ref|NP_001189675.1| ABC transporter C family member 2 [Arabidopsis thaliana] sp|Q42093.2|AB2C_ARATH RecName: Full=ABC transporter C family member 2; Short=ABC transporter ABCC.2; Short=AtABCC2; AltN 0.0
FL-Next: sp=ABC transporter C family member 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 2 0.0
Internal
uagpf_v2_unigene41996 uagpf v2.0 436
AutoFact: Cyclic peptide transporter n=1 Tax=Medicago truncatula RepID=Q2HRY7_MEDTR 5.0e-10
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 4.95656e-11
Internal
uagpf_v2_unigene42632 uagpf v2.0 381
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative coding
uagpf_v2_unigene43069 uagpf v2.0 234
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
Internal
uagpf_v2_unigene43520 uagpf v2.0 299
AutoFact: ABC transporter-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=ABC transporter C family member 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
uagpf_v2_unigene44083 uagpf v2.0 303
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 3.0e-19
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 1.68104e-22
Internal
uagpf_v2_unigene44851 uagpf v2.0 335
AutoFact: ABC transporter B family member 10 [Arabidopsis thaliana] sp|Q9SGY1.2|AB10B_ARATH RecName: Full=ABC transporter B family member 10; Short=ABC transporter ABCB.10; Short=AtABCB10; AltName: Full=Multidrug resistance protein 10; AltName: Full=P-glycoprotein 3.0e-12
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 2.60975e-15
Putative C-terminus
uagpf_v2_unigene45878 uagpf v2.0 284
AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
Blast2go: atp-binding cassette transporter 0.0
unknown
uagpf_v2_unigene46261 uagpf v2.0 364
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
Internal
uagpf_v2_unigene46843 uagpf v2.0 350
AutoFact: [V] COG1132 ABC-type multidrug transport system, ATPase and permease components 0.0001
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter family protein 0.0
Internal
uagpf_v2_unigene48439 uagpf v2.0 341
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
C-terminus
uagpf_v2_unigene48717 uagpf v2.0 348
AutoFact: Multidrug resistance protein ABC transporter family (Fragment) n=2 Tax=Populus trichocarpa RepID=B9N9A1_POPTR 0.0
FL-Next: sp=ABC transporter C family member 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: multidrug resistance protein abc transporter family 0.0
Internal
uagpf_v2_unigene48817 uagpf v2.0 361
AutoFact: Multidrug resistance-associated protein MRP1 (Fragment) n=1 Tax=Triticum aestivum RepID=Q8LGN7_WHEAT 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter c family member 5-like 0.0
C-terminus
uagpf_v2_unigene50102 uagpf v2.0 425
AutoFact: ABC transporter-like protein (Fragment) n=2 Tax=Picea sitchensis RepID=E0ZDW2_PICSI 1.0e-11
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter-like protein 2.17898e-15
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain