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Assembly Name: uagpf v2.0

Name: Snf7

Term: IPR005024  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene42025 uagpf v2.0 411
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene43906 uagpf v2.0 371
AutoFact: SNF7-like protein n=6 Tax=Arabidopsis RepID=F4IX33_ARATH 1.0e-15
Blast2go: snf7 family protein 4.73141e-18
unknown
uagpf_v2_unigene44448 uagpf v2.0 273
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene45838 uagpf v2.0 272
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED90947.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene46037 uagpf v2.0 301
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.12104e-44
Internal
uagpf_v2_unigene47959 uagpf v2.0 194
AutoFact: pfam05577, Peptidase_S28, Serine carboxypeptidase S28 8.0e-15
FL-Next: tr=Protein CHMP7, putative; Ricinus communis (Castor bean). 0.0
Blast2go: lysosomal pro-x carboxypeptidase-like 0.0
Internal
uagpf_v2_unigene50995 uagpf v2.0 1489
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar protein sorting-associated protein 32-2 0.0
Complete
uagpf_v2_unigene53754 uagpf v2.0 300
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene54220 uagpf v2.0 852
AutoFact: charged multivesicular body protein 5 [Arabidopsis thaliana] gb|AAF76370.1| unknown protein [Arabidopsis thaliana] gb|AAO64794.1| At3g10640 [Arabidopsis thaliana] dbj|BAF00173.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74937.1| charged multivesi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: charged multivesicular body protein 5 0.0
Putative Complete
uagpf_v2_unigene54787 uagpf v2.0 365
AutoFact: charged multivesicular body protein 5 [Arabidopsis thaliana] gb|AAF76370.1| unknown protein [Arabidopsis thaliana] gb|AAO64794.1| At3g10640 [Arabidopsis thaliana] dbj|BAF00173.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74937.1| charged multivesi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: charged multivesicular body protein 5 0.0
C-terminus
uagpf_v2_unigene54939 uagpf v2.0 713
AutoFact: Charged multivesicular body protein 5 n=3 Tax=Arabidopsis RepID=Q9FMC5_ARATH 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: charged multivesicular body protein 5 4.56347e-30
C-terminus
uagpf_v2_unigene55222 uagpf v2.0 482
AutoFact: charged multivesicular body protein 5 [Arabidopsis thaliana] gb|AAF76370.1| unknown protein [Arabidopsis thaliana] gb|AAO64794.1| At3g10640 [Arabidopsis thaliana] dbj|BAF00173.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74937.1| charged multivesi 0.0
Blast2go: charged multivesicular body protein 5 0.0
Coding
uagpf_v2_unigene55291 uagpf v2.0 286
AutoFact: charged multivesicular body protein 5 [Arabidopsis thaliana] gb|AAF76370.1| unknown protein [Arabidopsis thaliana] gb|AAO64794.1| At3g10640 [Arabidopsis thaliana] dbj|BAF00173.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74937.1| charged multivesi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: charged multivesicular body protein 5 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain