Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Germin

Term: IPR001929  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3183 uagpf v2.0 588
AutoFact: 5-formyltetrahydrofolate cyclo-ligase-like protein n=4 Tax=Arabidopsis RepID=Q8L539_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: 5-formyltetrahydrofolate cyclo-ligase 0.0
Putative N-terminus
uagpf_v2_unigene4547 uagpf v2.0 838
AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera] 0.0
Putative N-terminus
uagpf_v2_unigene6906 uagpf v2.0 1367
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
N-terminus
uagpf_v2_unigene7934 uagpf v2.0 1152
AutoFact: Rhicadhesin receptor precursor, putative (EC:1.15.1.1) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein subfamily 3 member 2-like 0.0
Complete
uagpf_v2_unigene8331 uagpf v2.0 403
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein 2-1-like 0.0
Putative N-terminus
uagpf_v2_unigene13440 uagpf v2.0 1695
AutoFact: Sphingolipid fatty acid alpha hydroxylase n=1 Tax=Ricinus communis RepID=B9SB09_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid 2-hydroxylase-like 0.0
Complete
uagpf_v2_unigene15431 uagpf v2.0 970
AutoFact: Cupin_1 multi-domain protein 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: germin-like protein 2-1-like 0.0
Complete
uagpf_v2_unigene15723 uagpf v2.0 876
AutoFact: 5-formyltetrahydrofolate cyclo-ligase-like protein n=4 Tax=Arabidopsis RepID=Q8L539_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5-formyltetrahydrofolate cyclo-ligase 0.0
C-terminus
uagpf_v2_unigene16786 uagpf v2.0 966
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
FL-Next: tr=Germin-like protein; Pinus caribaea. 0.0
Blast2go: germin-like protein 0.0
Complete
uagpf_v2_unigene19286 uagpf v2.0 440
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rhicadhesin receptor 0.0
Putative C-terminus
uagpf_v2_unigene19478 uagpf v2.0 924
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: germin-like protein 0.0
Complete
uagpf_v2_unigene20409 uagpf v2.0 1150
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.4013e-45
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene27851 uagpf v2.0 629
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene27855 uagpf v2.0 193
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene28139 uagpf v2.0 208
AutoFact: Germin-like protein 2 (Fragment) n=2 Tax=Picea abies RepID=Q4VSU6_PICAB 0.0
Blast2go: germin-like protein 2-1-like 0.0
unknown
uagpf_v2_unigene35522 uagpf v2.0 413
AutoFact: RVT_2 domain containing protein 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical retrotransposon 0.0
Internal
uagpf_v2_unigene36018 uagpf v2.0 638
AutoFact: Germin-like protein n=5 Tax=Pinaceae RepID=O65010_PINRA 0.0
FL-Next: tr=Germin-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: germin-like protein 0.0
C-terminus
uagpf_v2_unigene36527 uagpf v2.0 416
AutoFact: GK15001 gene product from transcript GK15001-RA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera] 0.0
Internal
uagpf_v2_unigene37573 uagpf v2.0 500
AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 0.0
Internal
uagpf_v2_unigene38204 uagpf v2.0 461
AutoFact: NV19190; similar to pol polyprotein 6.0e-14
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_040966 [Vitis vinifera] 4.34763e-40
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain