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Assembly Name: uagpf v2.0

Name: XS domain

Term: IPR005380  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6465 uagpf v2.0 323
AutoFact: putative transcription factor X1 [Triticum monococcum] 9.80909e-45
Blast2go: xh xs domain-containing protein 0.0
unknown
uagpf_v2_unigene7726 uagpf v2.0 816
AutoFact: XS domain containing protein 2.0e-23
Blast2go: uncharacterized protein 0.0
Putative coding
uagpf_v2_unigene8247 uagpf v2.0 1469
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative C-terminus
uagpf_v2_unigene9866 uagpf v2.0 1327
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative Complete
uagpf_v2_unigene12261 uagpf v2.0 519
AutoFact: XS domain containing protein 2.0e-23
Blast2go: uncharacterized protein 0.0
Coding
uagpf_v2_unigene12586 uagpf v2.0 1073
AutoFact: Os01g0147700 protein n=3 Tax=Oryza sativa RepID=Q5ZDL5_ORYSJ 5.0e-39
FL-Next: tr=Os01g0147700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: xh xs domain-containing protein 4.48416e-44
C-terminus
uagpf_v2_unigene13512 uagpf v2.0 352
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Coding
uagpf_v2_unigene15364 uagpf v2.0 671
AutoFact: WS01018.B21_E24 SS-R-N-A-11 Picea sitchensis cDNA clone WS01018_E24 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene16739 uagpf v2.0 753
AutoFact: XS domain containing protein 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene27454 uagpf v2.0 464
AutoFact: putative transcription factor X1 [Triticum monococcum] 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xh xs domain-containing protein 0.0
Internal
uagpf_v2_unigene30219 uagpf v2.0 296
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
N-terminus
uagpf_v2_unigene30840 uagpf v2.0 116
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
unknown
uagpf_v2_unigene33178 uagpf v2.0 221
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
uagpf_v2_unigene36869 uagpf v2.0 477
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
unknown
uagpf_v2_unigene39116 uagpf v2.0 138
AutoFact: WS01018.B21_E24 SS-R-N-A-11 Picea sitchensis cDNA clone WS01018_E24 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene50363 uagpf v2.0 345
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
uagpf_v2_unigene50951 uagpf v2.0 382
AutoFact: XS domain containing protein 2.0e-23
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene51510 uagpf v2.0 274
AutoFact: Os01g0147700 protein n=3 Tax=Oryza sativa RepID=Q5ZDL5_ORYSJ 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: xh xs domain-containing protein 4.48416e-44
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain