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Assembly Name: uagpf v2.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene39663 uagpf v2.0 240
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-26
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Blast2go: ramosa 1 enhancer locus 2 1.38002e-28
Internal
uagpf_v2_unigene41998 uagpf v2.0 443
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene42100 uagpf v2.0 381
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 4.18805e-33
Internal
uagpf_v2_unigene42257 uagpf v2.0 254
• AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9SJ92_RICCO 0.0
• FL-Next: sp=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 0.0
Internal
uagpf_v2_unigene42343 uagpf v2.0 315
• AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-07
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene42772 uagpf v2.0 302
• AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene43522 uagpf v2.0 307
• AutoFact: Unusual floral organs-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZHS5_PICSI 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unusual floral organs-like protein 0.0
Internal
uagpf_v2_unigene44211 uagpf v2.0 323
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.1108e-37
Internal
uagpf_v2_unigene45775 uagpf v2.0 393
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: topless-related protein 4 9.8361e-21
Internal
uagpf_v2_unigene46402 uagpf v2.0 357
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
uagpf_v2_unigene46982 uagpf v2.0 339
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 8.94806e-30
Internal
uagpf_v2_unigene47307 uagpf v2.0 358
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon ty1-copia subclass 2.00223e-28
Internal
uagpf_v2_unigene47540 uagpf v2.0 338
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 7.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 1.49448e-25
Internal
uagpf_v2_unigene49514 uagpf v2.0 438
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 4.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.31718e-37
N-terminus
uagpf_v2_unigene49912 uagpf v2.0 540
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
N-terminus
uagpf_v2_unigene50063 uagpf v2.0 454
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene50087 uagpf v2.0 484
• AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
• Blast2go: f-box kelch-repeat protein 0.0
unknown
uagpf_v2_unigene50171 uagpf v2.0 469
• AutoFact: Glycosyltransferase, CAZy family GT4 n=1 Tax=Selaginella moellendorffii RepID=D8QWP9_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene50824 uagpf v2.0 366
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 8.31008e-23
Putative N-terminus
uagpf_v2_unigene50891 uagpf v2.0 383
• AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain