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Assembly Name: uagpf v2.0

Name: F-box associated interaction domain

Term: IPR017451  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10234 uagpf v2.0 415
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene10350 uagpf v2.0 505
AutoFact: Topless-related protein 2 n=2 Tax=Arabidopsis RepID=TPR2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10427 uagpf v2.0 749
AutoFact: Glycosyltransferase, CAZy family GT4 n=1 Tax=Selaginella moellendorffii RepID=D8QWP9_SELML 0.0
FL-Next: tr=Glycosyltransferase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: glycosyl transferase family 1 protein 0.0
N-terminus
uagpf_v2_unigene10474 uagpf v2.0 596
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene10552 uagpf v2.0 553
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 1.62971e-42
Internal
uagpf_v2_unigene11075 uagpf v2.0 428
AutoFact: MAP7 multi-domain protein 1.0e-09
Coding
uagpf_v2_unigene11091 uagpf v2.0 597
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Topless-related protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene11365 uagpf v2.0 325
AutoFact: Beta transducin-like protein, putative [Solanum bulbocastanum] 6.0e-28
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 8.97972e-33
Internal
uagpf_v2_unigene11808 uagpf v2.0 1797
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene11964 uagpf v2.0 529
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 1.0e-34
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 1.4013e-45
C-terminus
uagpf_v2_unigene15367 uagpf v2.0 1094
AutoFact: Protein UNUSUAL FLORAL ORGANS, putative n=1 Tax=Ricinus communis RepID=B9RE08_RICCO 0.0
FL-Next: sp=F-box/kelch-repeat protein At3g61590; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box kelch-repeat protein 0.0
C-terminus
uagpf_v2_unigene16809 uagpf v2.0 1041
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 5.0e-31
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 8.71081e-31
Putative C-terminus
uagpf_v2_unigene18050 uagpf v2.0 718
AutoFact: Glycosyltransferase, CAZy family GT4 n=1 Tax=Selaginella moellendorffii RepID=D8QWP9_SELML 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: glycosyl transferase family 1 protein 0.0
C-terminus
uagpf_v2_unigene20360 uagpf v2.0 596
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
uagpf_v2_unigene20365 uagpf v2.0 1013
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene20379 uagpf v2.0 1498
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Complete
uagpf_v2_unigene20395 uagpf v2.0 984
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene20407 uagpf v2.0 1233
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
uagpf_v2_unigene20416 uagpf v2.0 901
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
uagpf_v2_unigene20429 uagpf v2.0 575
AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aaa family atpase cdc48 subfamily 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain