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Assembly Name: uagpf v2.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1774 uagpf v2.0 330
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus
uagpf_v2_unigene1829 uagpf v2.0 474
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 0.0
Blast2go: potassium transporter 0.0
Putative N-terminus
uagpf_v2_unigene2741 uagpf v2.0 563
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
Blast2go: potassium transporter 0.0
unknown
uagpf_v2_unigene3930 uagpf v2.0 2308
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r3h domain containing 0.0
Putative Complete
uagpf_v2_unigene4243 uagpf v2.0 786
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high affinity potassium transporter 0.0
C-terminus
uagpf_v2_unigene5685 uagpf v2.0 834
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 8.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 1.96745e-10
Putative coding
uagpf_v2_unigene6786 uagpf v2.0 586
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
C-terminus
uagpf_v2_unigene9069 uagpf v2.0 762
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: sp=Potassium transporter 10; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potasium transporter 0.0
Internal
uagpf_v2_unigene9201 uagpf v2.0 310
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
N-terminus
uagpf_v2_unigene10868 uagpf v2.0 374
AutoFact: putative potassium transporter [Oryza sativa Japonica Group] gb|EAZ05084.1| hypothetical protein OsI_27274 [Oryza sativa Indica Group] 0.0
Blast2go: potassium transporter 0.0
unknown
uagpf_v2_unigene10901 uagpf v2.0 585
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: sp=Probable potassium transporter 13; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 0.0
Internal
uagpf_v2_unigene13466 uagpf v2.0 600
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: r3h domain containing 0.0
N-terminus
uagpf_v2_unigene16705 uagpf v2.0 1642
AutoFact: R3h domain containing protein, putative n=1 Tax=Ricinus communis RepID=B9SG72_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r3h domain containing 0.0
Complete
uagpf_v2_unigene26044 uagpf v2.0 479
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
unknown
uagpf_v2_unigene26606 uagpf v2.0 410
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: sp=Potassium transporter 5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 5 0.0
Internal
uagpf_v2_unigene26610 uagpf v2.0 439
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] gb|AED94034.1| putative DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
Internal
uagpf_v2_unigene28085 uagpf v2.0 605
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: sp=Potassium transporter 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: high affinity potassium transporter 0.0
Internal
uagpf_v2_unigene29131 uagpf v2.0 395
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: sp=Probable potassium transporter 13; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 1-like 0.0
Internal
uagpf_v2_unigene29446 uagpf v2.0 411
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high affinity potassium transporter 0.0
N-terminus
uagpf_v2_unigene30206 uagpf v2.0 290
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high affinity potassium transporter 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain