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Assembly Name: uagpf v2.0

Name: Single-stranded nucleic acid binding R3H

Term: IPR001374  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30818 uagpf v2.0 130
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
unknown
uagpf_v2_unigene32403 uagpf v2.0 396
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Potassium transporter 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 0.0
Internal
uagpf_v2_unigene32455 uagpf v2.0 466
AutoFact: putative helicase [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dea(d h)-box rna helicase family protein 0.0
Internal
uagpf_v2_unigene34978 uagpf v2.0 119
AutoFact: protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] gb|AEC08442.1| protein helicase in vascular tissue and tapetum [Arabidopsis thaliana] 5.0e-07
Blast2go: probable atp-dependent rna helicase ythdc2-like 2.25235e-16
unknown
uagpf_v2_unigene35181 uagpf v2.0 345
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2CVL7_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Putative C-terminus
uagpf_v2_unigene35940 uagpf v2.0 369
AutoFact: putative potasium transporter [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
C-terminus
uagpf_v2_unigene38478 uagpf v2.0 427
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 6.68627e-38
Internal
uagpf_v2_unigene38598 uagpf v2.0 343
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
unknown
uagpf_v2_unigene38650 uagpf v2.0 372
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: sp=Potassium transporter 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 2 0.0
Internal
uagpf_v2_unigene40675 uagpf v2.0 372
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: sp=Potassium transporter 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium transporter 5 0.0
Internal
uagpf_v2_unigene40748 uagpf v2.0 293
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Internal
uagpf_v2_unigene41433 uagpf v2.0 216
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: sp=Potassium transporter 5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 5 0.0
Internal
uagpf_v2_unigene41802 uagpf v2.0 375
AutoFact: high-affinity K+ transporter [Capsicum annuum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 5 0.0
Putative C-terminus
uagpf_v2_unigene42747 uagpf v2.0 182
AutoFact: potassium transporter 1 [Arabidopsis thaliana] sp|O22397.2|POT1_ARATH RecName: Full=Potassium transporter 1; Short=AtKT1; Short=AtKUP1; Short=AtPOT1 gb|AAB87687.1| potassium transporter [Arabidopsis thaliana] gb|AAB88901.1| high-affinity potassium transpo 0.0
Blast2go: potassium transporter 1-like 0.0
unknown
uagpf_v2_unigene42853 uagpf v2.0 336
AutoFact: RecName: Full=Putative potassium transporter 12; AltName: Full=OsHAK12 emb|CAD21002.1| putative potasium transporter [Oryza sativa Japonica Group] gb|EAZ41864.1| hypothetical protein OsJ_26409 [Oryza sativa Japonica Group] 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable potassium transporter 11-like 5.34735e-42
Putative N-terminus
uagpf_v2_unigene43567 uagpf v2.0 354
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RUB7_RICCO 0.0
FL-Next: sp=Potassium transporter 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: high affinity potassium transporter 0.0
N-terminus
uagpf_v2_unigene44049 uagpf v2.0 201
AutoFact: Potassium transporter HAK2p n=1 Tax=Mesembryanthemum crystallinum RepID=Q94KC6_MESCR 0.0
FL-Next: sp=Potassium transporter 24; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: potassium transporter 2 0.0
Internal
uagpf_v2_unigene45319 uagpf v2.0 218
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-28
Blast2go: atp-dependent rna helicase a-like protein 1.35295e-40
unknown
uagpf_v2_unigene45679 uagpf v2.0 352
AutoFact: putative DEAD/H box polypeptide 36 protein [Oryza sativa Japonica Group] 1.0e-37
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent rna helicase a-like protein 9.80909e-45
Internal
uagpf_v2_unigene46338 uagpf v2.0 387
AutoFact: Potassium transporter, putative n=1 Tax=Ricinus communis RepID=B9RGU8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium transporter 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain