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Assembly Name: uagpf v2.0

Name: Ion transport

Term: IPR005821  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1538 uagpf v2.0 549
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
unknown
uagpf_v2_unigene1565 uagpf v2.0 888
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] emb|CAB40130.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] dbj|BAB08864.1| cyclic nucleotide and calmodulin-regulated ion channel [Arabidopsis thaliana] gb|AED96975. 0.0
FL-Next: sp=Putative cyclic nucleotide-gated ion channel 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
Internal
uagpf_v2_unigene1622 uagpf v2.0 489
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9SJA4.2|CNG14_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 14; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 14 dbj|BAF00079.1| putative cyclic nucleoti 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
Putative coding
uagpf_v2_unigene3043 uagpf v2.0 357
AutoFact: cyclic nucleotide-gated ion channel 1 [Arabidopsis thaliana] sp|O65717.1|CNGC1_ARATH RecName: Full=Cyclic nucleotide-gated ion channel 1; Short=AtCNGC1; AltName: Full=Cyclic nucleotide- and calmodulin-regulated ion channel 1 gb|AAK43954.1|AF370139_1 putat 0.0
Blast2go: cyclic nucleotide gated channel 0.0
unknown
uagpf_v2_unigene6007 uagpf v2.0 1329
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9STR6_RICCO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide gated channel 0.0
C-terminus
uagpf_v2_unigene10017 uagpf v2.0 434
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inward rectifying potassium channel 0.0
Internal
uagpf_v2_unigene25520 uagpf v2.0 481
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 5.0e-24
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 4.17076e-27
C-terminus
uagpf_v2_unigene27103 uagpf v2.0 467
AutoFact: Potassium channel GORK n=1 Tax=Arabidopsis thaliana RepID=GORK_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel skor 0.0
Internal
uagpf_v2_unigene28133 uagpf v2.0 297
AutoFact: Voltage-dependent calcium channel protein TPC1 n=2 Tax=Andropogoneae RepID=B6SP34_MAIZE 0.0
Blast2go: two-pore calcium channel 0.0
Coding
uagpf_v2_unigene29022 uagpf v2.0 210
AutoFact: Voltage-dependent calcium channel protein TPC1 n=2 Tax=Andropogoneae RepID=B6SP34_MAIZE 0.0
FL-Next: sp=Two pore calcium channel protein 1; Triticum aestivum (Wheat). 0.0
Blast2go: two-pore calcium channel 0.0
Internal
uagpf_v2_unigene29124 uagpf v2.0 727
AutoFact: cyclic nucleotide-gated channel C [Phaseolus vulgaris] 4.0e-32
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion 9.61438e-33
C-terminus
uagpf_v2_unigene35302 uagpf v2.0 261
AutoFact: RecName: Full=Potassium channel KOR1; AltName: Full=K(+) outward-rectifying channel 1 dbj|BAD45736.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] dbj|BAD45977.1| putative shaker-like potassium channel [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Potassium channel GORK; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: potassium channel skor-like 0.0
Putative C-terminus
uagpf_v2_unigene35977 uagpf v2.0 462
AutoFact: Inward rectifying potassium channel n=1 Tax=Cucumis melo RepID=Q0R4Q4_CUCME 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 2.55815e-16
C-terminus
uagpf_v2_unigene35978 uagpf v2.0 403
AutoFact: Potassium channel n=2 Tax=Solanum RepID=Q9LEG6_SOLLC 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 1.19532e-29
Internal
uagpf_v2_unigene39083 uagpf v2.0 340
AutoFact: putative cyclic nucleotide-regulated ion channel protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion 0.0
Internal
uagpf_v2_unigene41156 uagpf v2.0 479
AutoFact: Os02g0773400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZHE3_ORYSJ 2.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.01608e-34
Internal
uagpf_v2_unigene41901 uagpf v2.0 451
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SIE1_RICCO 0.0
FL-Next: sp=Cyclic nucleotide-gated ion channel 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cyclic nucleotide-gated ion channel 4 0.0
Internal
uagpf_v2_unigene42861 uagpf v2.0 313
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 2.0e-37
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 0.0
Internal
uagpf_v2_unigene43822 uagpf v2.0 305
AutoFact: Potassium channel KAT2, putative n=1 Tax=Ricinus communis RepID=B9S124_RICCO 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potassium channel 6.94108e-36
Internal
uagpf_v2_unigene44952 uagpf v2.0 195
AutoFact: Voltage-dependent calcium channel protein TPC1 n=2 Tax=Andropogoneae RepID=B6SP34_MAIZE 0.0
FL-Next: sp=Two pore calcium channel protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: two-pore calcium channel 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain