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Assembly Name: uagpf v2.0

Name: Glycoside hydrolase, family 13, N-terminal

Term: IPR004193  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3842 uagpf v2.0 2079
AutoFact: Starch branching enzyme II-2 n=2 Tax=Malus x domestica RepID=A4GW34_MALDO 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 0.0
C-terminus
uagpf_v2_unigene4764 uagpf v2.0 652
AutoFact: starch branching enzyme [Ipomoea batatas] 0.0
Blast2go: starch branching enzyme ii 0.0
Putative coding
uagpf_v2_unigene4847 uagpf v2.0 638
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
uagpf_v2_unigene4967 uagpf v2.0 816
AutoFact: protein limit dextrinase [Arabidopsis thaliana] sp|Q8GTR4.2|PULA1_ARATH RecName: Full=Pullulanase 1, chloroplastic; Short=AtPU1; AltName: Full=Protein LIMIT DEXTRINASE; Short=AtLDA; Flags: Precursor gb|AED90732.1| protein limit dextrinase [Arabidopsis tha 0.0
FL-Next: sp=NAD(P)H-quinone oxidoreductase subunit J, chloroplastic 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Blast2go: pullulanase chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene5839 uagpf v2.0 387
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AAF79876.1|AC000348_29 T7N9.13 [Arabidopsis thaliana] gb|AEE30776.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
Blast2go: 5 -amp-activated protein kinase subunit beta-2 0.0
Coding
uagpf_v2_unigene7631 uagpf v2.0 1050
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isoamylase chloroplastic-like 0.0
Putative Complete
uagpf_v2_unigene9794 uagpf v2.0 838
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: Isoform 2 of 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 0.0
Blast2go: starch branching enzyme 1 0.0
Putative C-terminus
uagpf_v2_unigene9802 uagpf v2.0 255
AutoFact: putative starch branching enzyme [Populus trichocarpa] 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: alpha amylase family protein 2.04487e-25
Internal
uagpf_v2_unigene15150 uagpf v2.0 538
AutoFact: Isoamylase isoform 1 n=2 Tax=Solanum tuberosum RepID=Q84YG7_SOLTU 0.0
FL-Next: sp=Isoamylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoamylase 0.0
C-terminus
uagpf_v2_unigene15724 uagpf v2.0 767
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
C-terminus
uagpf_v2_unigene16048 uagpf v2.0 673
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AAF79876.1|AC000348_29 T7N9.13 [Arabidopsis thaliana] gb|AEE30776.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: 5 -amp-activated protein kinase subunit beta-2 0.0
C-terminus
uagpf_v2_unigene16923 uagpf v2.0 546
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
C-terminus
uagpf_v2_unigene26531 uagpf v2.0 260
AutoFact: Isoamylase isoform 1 n=2 Tax=Solanum tuberosum RepID=Q84YG7_SOLTU 0.0
FL-Next: sp=Isoamylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoamylase 0.0
Internal
uagpf_v2_unigene27093 uagpf v2.0 496
AutoFact: Isoamylase-type starch debranching enzyme ISO2 n=3 Tax=Andropogoneae RepID=B6UFP5_MAIZE 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isoamylase-type starch debranching enzyme iso2 0.0
C-terminus
uagpf_v2_unigene30526 uagpf v2.0 302
AutoFact: pullulanase-like protein (starch debranching enzyme) [Arabidopsis thaliana] 0.0
FL-Next: sp=Pullulanase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pullulanase chloroplastic-like 0.0
Internal
uagpf_v2_unigene30901 uagpf v2.0 223
AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AAF79876.1|AC000348_29 T7N9.13 [Arabidopsis thaliana] gb|AEE30776.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -amp-activated protein kinase subunit beta-2 0.0
C-terminus
uagpf_v2_unigene31693 uagpf v2.0 348
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Blast2go: starch branching enzyme 1 0.0
Internal
uagpf_v2_unigene37359 uagpf v2.0 548
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
FL-Next: sp=Isoamylase 3, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isoamylase chloroplastic-like 0.0
Internal
uagpf_v2_unigene38569 uagpf v2.0 248
AutoFact: Isoamylase isoform 3 n=1 Tax=Solanum tuberosum RepID=Q84YG5_SOLTU 0.0
Blast2go: isoamylase chloroplastic-like 0.0
unknown
uagpf_v2_unigene39074 uagpf v2.0 437
AutoFact: 1,4-alpha-glucan branching enzyme (Fragment) n=1 Tax=Solanum tuberosum RepID=O04864_SOLTU 0.0
FL-Next: sp=1,4-alpha-glucan-branching enzyme; Solanum tuberosum (Potato). 0.0
Blast2go: starch branching enzyme 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain