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Assembly Name: uagpf v2.0

Name: Ubiquitin interacting motif

Term: IPR003903  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene32574 uagpf v2.0 401
AutoFact: Ataxin-3 like protein [Arabidopsis thaliana] sp|Q9M391.1|ATX3H_ARATH RecName: Full=Ataxin-3 homolog; AltName: Full=MJD1a-like; AltName: Full=Machado-Joseph disease-like protein emb|CAB70987.1| Machado-Joseph disease MJD1a-like protein [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ataxin-3 homolog 0.0
N-terminus
uagpf_v2_unigene33496 uagpf v2.0 289
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene34768 uagpf v2.0 249
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 3-like 0.0
Internal
uagpf_v2_unigene37965 uagpf v2.0 410
AutoFact: ubiquitin interaction motif-containing protein [Arabidopsis thaliana] gb|AAL47453.1| At1g43690/F2J6_4 [Arabidopsis thaliana] gb|AAO11534.1| At1g43690/F2J6_4 [Arabidopsis thaliana] gb|AEE31987.1| ubiquitin interaction motif-containing protein [Arabidopsis 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ubiquitin interaction motif-containing protein 0.0
Internal
uagpf_v2_unigene38096 uagpf v2.0 397
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9RST1_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: esterase lipase domain-containing protein 0.0
Internal
uagpf_v2_unigene38180 uagpf v2.0 267
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein Sb08g012560; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
uagpf_v2_unigene38368 uagpf v2.0 371
AutoFact: putative ubiquitin-protein ligase 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein ligase 1 0.0
Internal
uagpf_v2_unigene38410 uagpf v2.0 537
AutoFact: Cysteine-type peptidase, putative n=1 Tax=Ricinus communis RepID=B9T2T7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin thioesterase otu1 0.0
C-terminus
uagpf_v2_unigene38513 uagpf v2.0 399
AutoFact: similar to zinc ion binding 0.0
Blast2go: zinc ion binding 0.0
unknown
uagpf_v2_unigene38895 uagpf v2.0 333
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene39185 uagpf v2.0 307
AutoFact: UBX domain-containing protein [Arabidopsis thaliana] ref|NP_973827.1| UBX domain-containing protein [Arabidopsis thaliana] gb|AAK43884.1|AF370507_1 Unknown protein [Arabidopsis thaliana] gb|AAL47388.1| unknown protein [Arabidopsis thaliana] dbj|BAH19997.1 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ubx domain-containing protein 0.0
Internal
uagpf_v2_unigene39477 uagpf v2.0 478
AutoFact: ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) tropicalis] gb|AAH67999.1| ubiquitin protein ligase E3A (human papilloma virus E6-associated protein, Angelman syndrome) [Xenopus (Silurana) 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene39964 uagpf v2.0 344
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene40044 uagpf v2.0 390
AutoFact: sterile alpha motif and leucine zipper containing kinase AZK [Arabidopsis thaliana] gb|AAL77650.1| AT5g11850/F14F18_20 [Arabidopsis thaliana] gb|AED91727.1| sterile alpha motif and leucine zipper containing kinase AZK [Arabidopsis thaliana] 0.0
FL-Next: sp=Serine/threonine-protein kinase CTR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
Internal
uagpf_v2_unigene40245 uagpf v2.0 382
AutoFact: Alanyl-tRNA synthetase n=4 Tax=Arabidopsis RepID=SYA_ARATH 0.0
FL-Next: Isoform Cytoplasmic of Alanyl-tRNA synthetase OS=Arabidopsis thaliana GN=ALATS 0.0
Blast2go: alanyl-trna synthetase 0.0
Internal
uagpf_v2_unigene40705 uagpf v2.0 505
AutoFact: Protein kinase [Medicago truncatula] 0.0
Blast2go: protein kinase 0.0
unknown
uagpf_v2_unigene41870 uagpf v2.0 455
AutoFact: Contains similarity to ubiquitin carboxyl-terminal hydrolase 14 gb|Z35927 from S. cerevisiae [Arabidopsis thaliana] 1.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl1-like 5.54776e-37
Internal
uagpf_v2_unigene42092 uagpf v2.0 314
AutoFact: WS02827.CR_K08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02827_K08 3', mRNA sequence. 0.0
FL-Next: sp=Serine/threonine-protein kinase CTR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
Internal
uagpf_v2_unigene42641 uagpf v2.0 378
AutoFact: ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] gb|AEE86931.1| ACT-like protein tyrosine kinase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene44627 uagpf v2.0 313
AutoFact: UBX domain-containing protein [Arabidopsis thaliana] gb|AAK25974.1|AF360264_1 unknown protein [Arabidopsis thaliana] gb|AAN13184.1| unknown protein [Arabidopsis thaliana] gb|AEE84698.1| UBX domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubx domain-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain