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Assembly Name: uagpf v2.0

Name: Zinc finger, H2C2-type, histone UAS binding

Term: IPR015416  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene28151 uagpf v2.0 546
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene28790 uagpf v2.0 501
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: retrotransposon protein 0.0
Internal
uagpf_v2_unigene28808 uagpf v2.0 433
• AutoFact: RVT_1 domain containing protein 3.0e-31
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: ac051624_3 retroelement 0.0
N-terminus
uagpf_v2_unigene30035 uagpf v2.0 356
• AutoFact: RVT_1 domain containing protein 5.0e-16
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: uncharacterized protein partial 6.78913e-33
Putative C-terminus
uagpf_v2_unigene32212 uagpf v2.0 424
• AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 0.0
Putative Complete
uagpf_v2_unigene33385 uagpf v2.0 449
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative reverse transcriptase; Petunia hybrida (Petunia). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene34106 uagpf v2.0 263
• AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN4_9POAL 4.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: gag-pol polyprotein 7.54011e-17
Putative C-terminus
uagpf_v2_unigene34737 uagpf v2.0 393
• AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 3.01564e-32
Complete
uagpf_v2_unigene34875 uagpf v2.0 268
• AutoFact: Pol protein (Fragment) n=2 Tax=Picea abies RepID=Q9M6P0_PICAB 5.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein 8.61406e-21
Internal
uagpf_v2_unigene35423 uagpf v2.0 230
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: integrase 1.36968e-32
Internal
uagpf_v2_unigene35859 uagpf v2.0 431
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 1.4013e-45
Complete
uagpf_v2_unigene35937 uagpf v2.0 325
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene35945 uagpf v2.0 432
• AutoFact: putative reverse-transcriptase-like protein [Arabidopsis thaliana] emb|CAB78181.1| putative reverse-transcriptase-like protein [Arabidopsis thaliana] 5.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse-transcriptase-like protein 3.63293e-32
Putative Complete
uagpf_v2_unigene36889 uagpf v2.0 461
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 4.0e-28
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 7.86207e-38
Internal
uagpf_v2_unigene39442 uagpf v2.0 485
• AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene41928 uagpf v2.0 436
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 9.99967e-42
• FL-Next: tr=Putative gag-pol polyprotein; Petunia hybrida (Petunia). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
uagpf_v2_unigene42063 uagpf v2.0 457
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene42831 uagpf v2.0 279
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Ginkgo biloba RepID=Q9ARL0_GINBI 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 7.74644e-22
Internal
uagpf_v2_unigene43291 uagpf v2.0 339
• AutoFact: Putative retrotransposon protein, identical n=2 Tax=Solanum demissum RepID=Q6L3S2_SOLDE 2.0e-29
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 2.72557e-38
Putative N-terminus
uagpf_v2_unigene44605 uagpf v2.0 348
• AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVJ7_9POAL 8.0e-27
• FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 5.06301e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain