Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: U2 auxiliary factor small subunit

Term: IPR009145  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1367 uagpf v2.0 771
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 0.0
N-terminus
uagpf_v2_unigene1427 uagpf v2.0 637
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
N-terminus
uagpf_v2_unigene2253 uagpf v2.0 760
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
uagpf_v2_unigene4596 uagpf v2.0 376
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
uagpf_v2_unigene5899 uagpf v2.0 1548
AutoFact: floral homeotic protein HUA1 [Arabidopsis thaliana] 0.0
FL-Next: sp=Phospholipase D; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 0.0
Internal
uagpf_v2_unigene13277 uagpf v2.0 898
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=2 Tax=rosids RepID=B9R8U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af 38 kda subunit 0.0
C-terminus
uagpf_v2_unigene19625 uagpf v2.0 933
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
Blast2go: u2 snrnp auxiliary small 0.0
unknown
uagpf_v2_unigene25138 uagpf v2.0 743
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 9.80909e-45
Blast2go: zinc finger ccch domain-containing protein 32 0.0
unknown
uagpf_v2_unigene39906 uagpf v2.0 226
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Coding
uagpf_v2_unigene40219 uagpf v2.0 419
AutoFact: putative U2 snRNP auxiliary factor [Chenopodium rubrum] 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus
uagpf_v2_unigene43617 uagpf v2.0 167
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
Internal
uagpf_v2_unigene49223 uagpf v2.0 288
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af small subunit b-like 0.0
Internal
uagpf_v2_unigene54708 uagpf v2.0 362
AutoFact: U2 snrnp auxiliary factor, small subunit, putative n=1 Tax=Ricinus communis RepID=B9SRG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain