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Assembly Name: uagpf v2.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45759 uagpf v2.0 328
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
Blast2go: auxin response factor-like protein 0.0
Coding
uagpf_v2_unigene46011 uagpf v2.0 322
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LS25.1|PP420_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46580, chloroplastic; Flags: Precursor dbj|BAA97529.1| unnamed protein product [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46916 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48099 uagpf v2.0 194
AutoFact: DUF1771 multi-domain protein 5.0e-16
Blast2go: protein 0.0
unknown
uagpf_v2_unigene48959 uagpf v2.0 409
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus
uagpf_v2_unigene49806 uagpf v2.0 572
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.55616e-34
Internal
uagpf_v2_unigene50051 uagpf v2.0 603
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 1.01081e-28
C-terminus
uagpf_v2_unigene52666 uagpf v2.0 467
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: sp=Auxin response factor 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene53447 uagpf v2.0 398
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
Blast2go: auxin response factor 2 0.0
unknown
uagpf_v2_unigene54064 uagpf v2.0 381
AutoFact: DUF296 domain containing protein 1.0e-35
Blast2go: dna-binding protein escarola-like 0.0
Putative coding
uagpf_v2_unigene54515 uagpf v2.0 291
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
Blast2go: auxin response 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain