Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30750 uagpf v2.0 338
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene31127 uagpf v2.0 309
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
uagpf_v2_unigene31422 uagpf v2.0 677
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene32321 uagpf v2.0 431
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQZ0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene32658 uagpf v2.0 273
AutoFact: auxin response factor 6a [Oryza sativa] 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 2.8026e-45
Putative N-terminus
uagpf_v2_unigene32793 uagpf v2.0 355
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
uagpf_v2_unigene35061 uagpf v2.0 320
AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 1.0e-14
Blast2go: auxin response factor-like protein 1.28782e-15
unknown
uagpf_v2_unigene35128 uagpf v2.0 390
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
N-terminus
uagpf_v2_unigene36151 uagpf v2.0 523
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
unknown
uagpf_v2_unigene37323 uagpf v2.0 516
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
uagpf_v2_unigene39097 uagpf v2.0 336
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39125 uagpf v2.0 400
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
N-terminus
uagpf_v2_unigene39918 uagpf v2.0 372
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 4.0e-39
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.4013e-45
Putative N-terminus
uagpf_v2_unigene40132 uagpf v2.0 441
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene41104 uagpf v2.0 345
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SAK0.1|PP132_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE 2217; Flags: Precursor gb|AAD30226.1|AC00 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g79490, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene41204 uagpf v2.0 448
AutoFact: pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAL24260.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AAM61052.1| unknown [Arabidopsis thaliana] gb|AAM65354.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AED97092.1| pfkB-like ca 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene41458 uagpf v2.0 416
AutoFact: pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAL24260.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AAM61052.1| unknown [Arabidopsis thaliana] gb|AAM65354.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AED97092.1| pfkB-like ca 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene41505 uagpf v2.0 267
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
Blast2go: auxin response factor 2 0.0
Putative coding
uagpf_v2_unigene42718 uagpf v2.0 360
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal
uagpf_v2_unigene43254 uagpf v2.0 232
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53360, mitochondrial; Flags: Precursor emb|CAB67643.1| putative protein [Arabidopsis thaliana] gb|AEE7 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.97802e-19
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain