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Assembly Name: uagpf v2.0

Name: Smr protein/MutS2 C-terminal

Term: IPR002625  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13617 uagpf v2.0 850
AutoFact: pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana] gb|AAL24260.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AAM61052.1| unknown [Arabidopsis thaliana] gb|AAM65354.1| AT5g58730/mzn1_180 [Arabidopsis thaliana] gb|AED97092.1| pfkB-like ca 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene14192 uagpf v2.0 655
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene14371 uagpf v2.0 1455
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJW1_RICCO 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
uagpf_v2_unigene15221 uagpf v2.0 731
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.55616e-34
Internal
uagpf_v2_unigene16283 uagpf v2.0 515
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
Blast2go: protein 2.55616e-34
unknown
uagpf_v2_unigene16760 uagpf v2.0 875
AutoFact: DUF296 multi-domain protein 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein escarola-like 1.62791e-09
C-terminus
uagpf_v2_unigene17564 uagpf v2.0 626
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: sp=Auxin response factor 6; Oryza sativa subsp. japonica (Rice). 0.0
C-terminus
uagpf_v2_unigene17640 uagpf v2.0 484
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: Isoform 2 of Auxin response factor 6 OS=Arabidopsis thaliana GN=ARF6 0.0
Internal
uagpf_v2_unigene18450 uagpf v2.0 1289
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Internal
uagpf_v2_unigene18567 uagpf v2.0 650
AutoFact: DUF296 domain containing protein 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
uagpf_v2_unigene25710 uagpf v2.0 381
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R930_RICCO 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g18900; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene26217 uagpf v2.0 468
AutoFact: DUF1771 multi-domain protein 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: smr (small related) domain-containing protein 2.72313e-37
C-terminus
uagpf_v2_unigene26387 uagpf v2.0 504
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene27085 uagpf v2.0 323
AutoFact: DUF296 multi-domain protein 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
Internal
uagpf_v2_unigene27115 uagpf v2.0 318
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene27827 uagpf v2.0 406
AutoFact: Auxin response factor-like protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBL7_CUCME 1.0e-14
Blast2go: auxin response factor-like protein 1.28782e-15
unknown
uagpf_v2_unigene27943 uagpf v2.0 291
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
Blast2go: auxin response factor-like protein 0.0
Putative coding
uagpf_v2_unigene28446 uagpf v2.0 404
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SI24_RICCO 9.80909e-45
Blast2go: smr (small related) domain-containing protein 0.0
unknown
uagpf_v2_unigene30001 uagpf v2.0 460
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 2 0.0
C-terminus
uagpf_v2_unigene30661 uagpf v2.0 360
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SI24_RICCO 9.80909e-45
Blast2go: smr (small related) domain-containing protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain