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Assembly Name: uagpf v2.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene48987 uagpf v2.0 316
AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 5.0e-33
Blast2go: transcription factor bhlh30 0.0
unknown
uagpf_v2_unigene50539 uagpf v2.0 193
AutoFact: DNA binding protein-like [Oryza sativa Japonica Group] 2.0e-16
Blast2go: transcription factor bhlh30 3.08156e-24
unknown
uagpf_v2_unigene50845 uagpf v2.0 425
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK24_9ASPA 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh121-like 6.02558e-44
Internal
uagpf_v2_unigene52326 uagpf v2.0 418
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
uagpf_v2_unigene52472 uagpf v2.0 175
AutoFact: bHLH transcription factor [Arabidopsis thaliana] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene53790 uagpf v2.0 394
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.79705e-15
C-terminus
uagpf_v2_unigene53859 uagpf v2.0 452
AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 6.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
uagpf_v2_unigene54809 uagpf v2.0 411
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh36 0.0
C-terminus
uagpf_v2_unigene55025 uagpf v2.0 432
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh36 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain